fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032888 not found in 271aa AT5G40710.1 1st_1st 0.600767754 Ia
Pt027014 not found in 266aa AT5G63280.1 not_not 0.533589251 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40710.1     MGRSNSQCPSHWI--LLCFFISSQFWGFSLPTSIIQQNLEGFKDPEDGFHEIHCSRERSR
pt032888_POPTR_ MGLTRKQLTILFL--CLCFTVFLQLTSVSSSTS-PQGQKETASSSFEHEKEVHCSRERSR
pt027014_POPTR_ MGKAARITQILFLISLLSKQILSQDVGEHVAAR-------TVKQEEGHAHKVHCSRERSR
                ** :       ::   *.  :  *  .   .:          ..     :::********

AT5G40710.1     VAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKKAFYE
pt032888_POPTR_ AAWKIIDEYLMPFVEKERYKISSRCRLHPENDLYRDQEQHKMHVDINEWRCGYCKKTFYE
pt027014_POPTR_ AAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKKHFRA
                .**: *:*****:**:*:*::.* **:* .**::*:**:**:: *****:**:*** *  

AT5G40710.1     EKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPAAAAKNRHLCES
pt032888_POPTR_ EKYLDKHFDNRHYDLLNVSHSKCLADVCGVLHCDLVLDSAPHKTKCNPAATGRNKHLCES
pt027014_POPTR_ EKYLDQHFDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPAAVAKNHHLCES
                *****:***.***:*** *..**::*:**.****:::*:   *:******..:*:*****

AT5G40710.1     LANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKR-SIVYIIFSIIVLVV
pt032888_POPTR_ LADSCFPVNEGTSALRLNEFFLRQFCDAHTCSGGRKPFSKGGKKETSTLYVIISVLVLML
pt027014_POPTR_ LADSCFPLNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVFYLAISILTMMM
                **:****:*:*.** **:::**:**********. * :.:  **. * .*: :*::.:::

AT5G40710.1     LLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
pt032888_POPTR_ LALFYIFMYLYLRGIKRGSQGLKHISKSGQKKRS-
pt027014_POPTR_ IPLFYLIVYLHQSEMRKGTQELRRISKRKTKPS--
                : *:* ::**.   ::: :* *::* :   *
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     M G R S N S Q C P S H W I - - L L C F F I S S Q F W G F S L P T S I I Q Q N L E G F K D P E D G F H E I H C S R E R S R
pt032888_POPTR_    M G L T R K Q L T I L F L - - C L C F T V F L Q L T S V S S S T S - P Q G Q K E T A S S S F E H E K E V H C S R E R S R
pt027014_POPTR_    M G K A A R I T Q I L F L I S L L S K Q I L S Q D V G E H V A A R - - - - - - - T V K Q E E G H A H K V H C S R E R S R
 
AT5G40710.1     V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S D I N E W R C G F C K K A F Y E
pt032888_POPTR_    A A W K I I D E Y L M P F V E K E R Y K I S S R C R L H P E N D L Y R D Q E Q H K M H V D I N E W R C G Y C K K T F Y E
pt027014_POPTR_    A A W Q A I E E Y L M P F V E R E Q Y Q I S S K C R L H P S N D L F R D Q E E H K I H V D I N E W K C G Y C K K H F R A
 
AT5G40710.1     E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R L K S K C N P A A A A K N R H L C E S
pt032888_POPTR_    E K Y L D K H F D N R H Y D L L N V S H S K C L A D V C G V L H C D L V L D S A P H K T K C N P A A T G R N K H L C E S
pt027014_POPTR_    E K Y L D Q H F D N R H Y N L L N I S D G K C M A D L C G A L H C D F M M D S K S T K T K C N P A A V A K N H H L C E S
 
AT5G40710.1     L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K P K K R - S I V Y I I F S I I V L V V
pt032888_POPTR_    L A D S C F P V N E G T S A L R L N E F F L R Q F C D A H T C S G G R K P F S K G G K K E T S T L Y V I I S V L V L M L
pt027014_POPTR_    L A D S C F P L N Q G P S A S R L H E L F L H Q F C D A H T C S G N K K L F P K G G K K K T S V F Y L A I S I L T M M M
 
AT5G40710.1     L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
pt032888_POPTR_    L A L F Y I F M Y L Y L R G I K R G S Q G L K H I S K S G Q K K R S -
pt027014_POPTR_    I P L F Y L I V Y L H Q S E M R K G T Q E L R R I S K R K T K P S - -
 
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