Input
| Putative repression domain
|
|
AT5G40710.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt032888 |
not found in 271aa |
AT5G40710.1 |
1st_1st |
0.600767754 |
Ia |
Pt027014 |
not found in 266aa |
AT5G63280.1 |
not_not |
0.533589251 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G40710.1 MGRSNSQCPSHWI--LLCFFISSQFWGFSLPTSIIQQNLEGFKDPEDGFHEIHCSRERSR
pt032888_POPTR_ MGLTRKQLTILFL--CLCFTVFLQLTSVSSSTS-PQGQKETASSSFEHEKEVHCSRERSR
pt027014_POPTR_ MGKAARITQILFLISLLSKQILSQDVGEHVAAR-------TVKQEEGHAHKVHCSRERSR
** : :: *. : * . .: .. :::********
AT5G40710.1 VAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKKAFYE
pt032888_POPTR_ AAWKIIDEYLMPFVEKERYKISSRCRLHPENDLYRDQEQHKMHVDINEWRCGYCKKTFYE
pt027014_POPTR_ AAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKKHFRA
.**: *:*****:**:*:*::.* **:* .**::*:**:**:: *****:**:*** *
AT5G40710.1 EKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPAAAAKNRHLCES
pt032888_POPTR_ EKYLDKHFDNRHYDLLNVSHSKCLADVCGVLHCDLVLDSAPHKTKCNPAATGRNKHLCES
pt027014_POPTR_ EKYLDQHFDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPAAVAKNHHLCES
*****:***.***:*** *..**::*:**.****:::*: *:******..:*:*****
AT5G40710.1 LANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKR-SIVYIIFSIIVLVV
pt032888_POPTR_ LADSCFPVNEGTSALRLNEFFLRQFCDAHTCSGGRKPFSKGGKKETSTLYVIISVLVLML
pt027014_POPTR_ LADSCFPLNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVFYLAISILTMMM
**:****:*:*.** **:::**:**********. * :.: **. * .*: :*::.:::
AT5G40710.1 LLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
pt032888_POPTR_ LALFYIFMYLYLRGIKRGSQGLKHISKSGQKKRS-
pt027014_POPTR_ IPLFYLIVYLHQSEMRKGTQELRRISKRKTKPS--
: *:* ::**. ::: :* *::* : *
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1 |
M |
G |
R |
S |
N |
S |
Q |
C |
P |
S |
H |
W |
I |
- |
- |
L |
L |
C |
F |
F |
I |
S |
S |
Q |
F |
W |
G |
F |
S |
L |
P |
T |
S |
I |
I |
Q |
Q |
N |
L |
E |
G |
F |
K |
D |
P |
E |
D |
G |
F |
H |
E |
I |
H |
C |
S |
R |
E |
R |
S |
R |
pt032888_POPTR_ |
M |
G |
L |
T |
R |
K |
Q |
L |
T |
I |
L |
F |
L |
- |
- |
C |
L |
C |
F |
T |
V |
F |
L |
Q |
L |
T |
S |
V |
S |
S |
S |
T |
S |
- |
P |
Q |
G |
Q |
K |
E |
T |
A |
S |
S |
S |
F |
E |
H |
E |
K |
E |
V |
H |
C |
S |
R |
E |
R |
S |
R |
pt027014_POPTR_ |
M |
G |
K |
A |
A |
R |
I |
T |
Q |
I |
L |
F |
L |
I |
S |
L |
L |
S |
K |
Q |
I |
L |
S |
Q |
D |
V |
G |
E |
H |
V |
A |
A |
R |
- |
- |
- |
- |
- |
- |
- |
T |
V |
K |
Q |
E |
E |
G |
H |
A |
H |
K |
V |
H |
C |
S |
R |
E |
R |
S |
R |
|
AT5G40710.1 |
V |
A |
W |
K |
I |
I |
Q |
E |
Y |
L |
M |
P |
Y |
V |
E |
K |
E |
R |
Y |
Q |
L |
P |
S |
T |
C |
R |
V |
H |
R |
D |
N |
D |
I |
Y |
R |
E |
Q |
E |
E |
H |
K |
L |
R |
S |
D |
I |
N |
E |
W |
R |
C |
G |
F |
C |
K |
K |
A |
F |
Y |
E |
pt032888_POPTR_ |
A |
A |
W |
K |
I |
I |
D |
E |
Y |
L |
M |
P |
F |
V |
E |
K |
E |
R |
Y |
K |
I |
S |
S |
R |
C |
R |
L |
H |
P |
E |
N |
D |
L |
Y |
R |
D |
Q |
E |
Q |
H |
K |
M |
H |
V |
D |
I |
N |
E |
W |
R |
C |
G |
Y |
C |
K |
K |
T |
F |
Y |
E |
pt027014_POPTR_ |
A |
A |
W |
Q |
A |
I |
E |
E |
Y |
L |
M |
P |
F |
V |
E |
R |
E |
Q |
Y |
Q |
I |
S |
S |
K |
C |
R |
L |
H |
P |
S |
N |
D |
L |
F |
R |
D |
Q |
E |
E |
H |
K |
I |
H |
V |
D |
I |
N |
E |
W |
K |
C |
G |
Y |
C |
K |
K |
H |
F |
R |
A |
|
AT5G40710.1 |
E |
K |
Y |
L |
D |
K |
H |
F |
D |
S |
R |
H |
Y |
N |
L |
L |
N |
A |
S |
H |
G |
K |
C |
L |
S |
D |
L |
C |
G |
A |
L |
H |
C |
D |
L |
V |
V |
D |
T |
A |
R |
L |
K |
S |
K |
C |
N |
P |
A |
A |
A |
A |
K |
N |
R |
H |
L |
C |
E |
S |
pt032888_POPTR_ |
E |
K |
Y |
L |
D |
K |
H |
F |
D |
N |
R |
H |
Y |
D |
L |
L |
N |
V |
S |
H |
S |
K |
C |
L |
A |
D |
V |
C |
G |
V |
L |
H |
C |
D |
L |
V |
L |
D |
S |
A |
P |
H |
K |
T |
K |
C |
N |
P |
A |
A |
T |
G |
R |
N |
K |
H |
L |
C |
E |
S |
pt027014_POPTR_ |
E |
K |
Y |
L |
D |
Q |
H |
F |
D |
N |
R |
H |
Y |
N |
L |
L |
N |
I |
S |
D |
G |
K |
C |
M |
A |
D |
L |
C |
G |
A |
L |
H |
C |
D |
F |
M |
M |
D |
S |
K |
S |
T |
K |
T |
K |
C |
N |
P |
A |
A |
V |
A |
K |
N |
H |
H |
L |
C |
E |
S |
|
AT5G40710.1 |
L |
A |
N |
S |
C |
F |
P |
V |
N |
K |
G |
S |
S |
A |
N |
R |
L |
H |
D |
F |
F |
L |
R |
Q |
F |
C |
D |
A |
H |
T |
C |
S |
G |
G |
S |
K |
P |
L |
S |
Q |
K |
P |
K |
K |
R |
- |
S |
I |
V |
Y |
I |
I |
F |
S |
I |
I |
V |
L |
V |
V |
pt032888_POPTR_ |
L |
A |
D |
S |
C |
F |
P |
V |
N |
E |
G |
T |
S |
A |
L |
R |
L |
N |
E |
F |
F |
L |
R |
Q |
F |
C |
D |
A |
H |
T |
C |
S |
G |
G |
R |
K |
P |
F |
S |
K |
G |
G |
K |
K |
E |
T |
S |
T |
L |
Y |
V |
I |
I |
S |
V |
L |
V |
L |
M |
L |
pt027014_POPTR_ |
L |
A |
D |
S |
C |
F |
P |
L |
N |
Q |
G |
P |
S |
A |
S |
R |
L |
H |
E |
L |
F |
L |
H |
Q |
F |
C |
D |
A |
H |
T |
C |
S |
G |
N |
K |
K |
L |
F |
P |
K |
G |
G |
K |
K |
K |
T |
S |
V |
F |
Y |
L |
A |
I |
S |
I |
L |
T |
M |
M |
M |
|
AT5G40710.1 |
L |
L |
L |
Y |
Y |
S |
F |
V |
Y |
L |
F |
R |
R |
G |
L |
K |
R |
R |
S |
Q |
D |
L |
K |
R |
I |
R |
H |
N |
G |
L |
K |
K |
K |
P |
F |
pt032888_POPTR_ |
L |
A |
L |
F |
Y |
I |
F |
M |
Y |
L |
Y |
L |
R |
G |
I |
K |
R |
G |
S |
Q |
G |
L |
K |
H |
I |
S |
K |
S |
G |
Q |
K |
K |
R |
S |
- |
pt027014_POPTR_ |
I |
P |
L |
F |
Y |
L |
I |
V |
Y |
L |
H |
Q |
S |
E |
M |
R |
K |
G |
T |
Q |
E |
L |
R |
R |
I |
S |
K |
R |
K |
T |
K |
P |
S |
- |
- |
|
|