fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os040558 not found in 275aa AT5G63280.1 1st_not 0.531669865 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40710.1     -----MGRSNSQCPSHWILLCFFISSQFWGFSLPTSIIQQNLEGFKDPEDGFHE------
Os040558_Os12t0 MPRREGGRSRSAA-----YLVLFASCL---LAVAAASHQE-----------FHEAAGSRT
                      ***.* .      * :* *.    :::.::  *:           ***      

AT5G40710.1     ----------IHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHK
Os040558_Os12t0 LLMSHEHTNQVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRLHPGNDMFREQEQHK
                          :********.*** *:*****:****:*:***.**:* .**::****:**

AT5G40710.1     LRSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTAR
Os040558_Os12t0 IHFDINEWRCGFCKKAFRAEKFLDQHFHNRHNNLVDNSQGRCLADLCGALHCDLMLEFKK
                :: **************  **:**:**..** **:: *:*:**:**********:::  :

AT5G40710.1     LKSKCNPAAAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQK
Os040558_Os12t0 PKSKCSATAAARNRHLCESLADSCFPINQGQSASRLHEFLLRQFCDAHTCKNGSKPFPKG
                 ****..:***:*********:****:*:*.**.***:*:**********..****:.: 

AT5G40710.1     PKKRS-IVYIIFSIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
Os040558_Os12t0 GRKQTNRFYLALCALTIVLLPLFYLIVFLHQREMKKGGQNLRRISKVVQKKKPS
                 :*::  .*: :. :.:*:* *:* :*:*.:* :*: .*:*:** :   ****
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     - - - - - M G R S N S Q C P S H W I L L C F F I S S Q F W G F S L P T S I I Q Q N L E G F K D P E D G F H E - - - - - -
Os040558_Os12t0    M P R R E G G R S R S A A - - - - - Y L V L F A S C L - - - L A V A A A S H Q E - - - - - - - - - - - F H E A A G S R T
 
AT5G40710.1     - - - - - - - - - - I H C S R E R S R V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K
Os040558_Os12t0    L L M S H E H T N Q V H C S R E R S R A A W K A I D E Y L M P F V E K E K Y E L P S K C R L H P G N D M F R E Q E Q H K
 
AT5G40710.1     L R S D I N E W R C G F C K K A F Y E E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R
Os040558_Os12t0    I H F D I N E W R C G F C K K A F R A E K F L D Q H F H N R H N N L V D N S Q G R C L A D L C G A L H C D L M L E F K K
 
AT5G40710.1     L K S K C N P A A A A K N R H L C E S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K
Os040558_Os12t0    P K S K C S A T A A A R N R H L C E S L A D S C F P I N Q G Q S A S R L H E F L L R Q F C D A H T C K N G S K P F P K G
 
AT5G40710.1     P K K R S - I V Y I I F S I I V L V V L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
Os040558_Os12t0    G R K Q T N R F Y L A L C A L T I V L L P L F Y L I V F L H Q R E M K K G G Q N L R R I S K V V Q K K K P S
 
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