fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031576 not found in 387aa AT5G63280.1 1st_not 0.541266794 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40710.1     --------MGRSNSQ-CPSH----WILLCFFISS----------QFWGFSLPTSIIQQNL
Sb031576_Sorbi1 APATRRRDLGTSRMLCCAGHLAPLLLLALFSVSSLLFVDGSHQDQEFREAVGSRILLQT-
                        :* *.   *..*     :*  * :**          * :  :: : *: *. 

AT5G40710.1     EGFKDPEDGFHEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEE
Sb031576_Sorbi1 ----NPDA--HEVHCSRERSRAAWEAIDEYLMPFVEKEKYELPSKCRLRPDNDMFREQEQ
                    :*:   **:********.**: *:*****:****:*:***.**:: ***::****:

AT5G40710.1     HKLRSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDT
Sb031576_Sorbi1 HKIHFDINEWHCGFCKKAFRAEKFLDQHFENRHKNLVDNSEGRCMADLCGALHCDLMMQF
                **:: *****:********  **:**:**:.** **:: *.*:*::**********::: 

AT5G40710.1     ARLKSKCNPAAAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLS
Sb031576_Sorbi1 KKPKSKCNAAAATRNRHLCESLADSCFPVNQGLAASRLHEFFLRQFCDAHTCNKGTKPFP
                 : *****.***::*********:******:* :*.***:************. *:**:.

AT5G40710.1     QKPKKRS-IVYIIFSIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
Sb031576_Sorbi1 KGGRKQTNRFYLALCILTLILLPLFYLIVFLHQREMRKGTQDLKRFSKIGQKKKPS
                :  :*::  .*: :.*:.*::* *:* :*:*.:* ::: :*****: : * ****
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     - - - - - - - - M G R S N S Q - C P S H - - - - W I L L C F F I S S - - - - - - - - - - Q F W G F S L P T S I I Q Q N L
Sb031576_Sorbi1    A P A T R R R D L G T S R M L C C A G H L A P L L L L A L F S V S S L L F V D G S H Q D Q E F R E A V G S R I L L Q T -
 
AT5G40710.1     E G F K D P E D G F H E I H C S R E R S R V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E
Sb031576_Sorbi1    - - - - N P D A - - H E V H C S R E R S R A A W E A I D E Y L M P F V E K E K Y E L P S K C R L R P D N D M F R E Q E Q
 
AT5G40710.1     H K L R S D I N E W R C G F C K K A F Y E E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T
Sb031576_Sorbi1    H K I H F D I N E W H C G F C K K A F R A E K F L D Q H F E N R H K N L V D N S E G R C M A D L C G A L H C D L M M Q F
 
AT5G40710.1     A R L K S K C N P A A A A K N R H L C E S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S
Sb031576_Sorbi1    K K P K S K C N A A A A T R N R H L C E S L A D S C F P V N Q G L A A S R L H E F F L R Q F C D A H T C N K G T K P F P
 
AT5G40710.1     Q K P K K R S - I V Y I I F S I I V L V V L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
Sb031576_Sorbi1    K G G R K Q T N R F Y L A L C I L T L I L L P L F Y L I V F L H Q R E M R K G T Q D L K R F S K I G Q K K K P S
 
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