fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049063 not found in 268aa AT5G63280.1 1st_not 0.575815738 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40710.1     MGRSNSQCPSHWILLCFFISSQFWGFSLPTSIIQQNLEGFKDPEDGFHEIHCSRERSRVA
gm049063_Glyma1 MWLSD-----HRLFLLCIVCGLYFSLQFTTGHADSNAGRTLNQEGGDHQIHCSRERSRTA
                *  *:     * ::*  ::.. ::.:.:.*.  :.*     : *.* *:*********.*

AT5G40710.1     WKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKKAFYEEK
gm049063_Glyma1 WKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEQHKFHTDINEWQCGFCKKSFYEEK
                **********:****:*::.. **:* ******:**:**:::*****:******:*****

AT5G40710.1     YLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPAAAAKNRHLCESLA
gm049063_Glyma1 HLDQHFDNRHSNLLNLSESQCIADVCGALHCDHEMNSGSKKSKCNPAAAAKNKHLCESLA
                :**:***.** **** *..:*::*:*******  :::.  ************:*******

AT5G40710.1     NSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQ-KPKKRSIVYIIFSIIVLVVLL
gm049063_Glyma1 DSCFPVTEGPAASRLHEFFLHQFCDAHSCTGNRKPFSRGRRKKTNVFYIFVSILLVILLL
                :*****.:*.:*.***:***:******:*:*. **:*: : ** .:.**:.**:::::**

AT5G40710.1     LYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
gm049063_Glyma1 LYYLYIYLYQRGMKRETQVLKRVSQASRKKKPS
                *** ::**::**:**.:* ***: : . ****
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     M G R S N S Q C P S H W I L L C F F I S S Q F W G F S L P T S I I Q Q N L E G F K D P E D G F H E I H C S R E R S R V A
gm049063_Glyma1    M W L S D - - - - - H R L F L L C I V C G L Y F S L Q F T T G H A D S N A G R T L N Q E G G D H Q I H C S R E R S R T A
 
AT5G40710.1     W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S D I N E W R C G F C K K A F Y E E K
gm049063_Glyma1    W K I I Q E Y L M P F V E K E K Y H I S K R C R L H P D N D I Y R D Q E Q H K F H T D I N E W Q C G F C K K S F Y E E K
 
AT5G40710.1     Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R L K S K C N P A A A A K N R H L C E S L A
gm049063_Glyma1    H L D Q H F D N R H S N L L N L S E S Q C I A D V C G A L H C D H E M N S G S K K S K C N P A A A A K N K H L C E S L A
 
AT5G40710.1     N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q - K P K K R S I V Y I I F S I I V L V V L L
gm049063_Glyma1    D S C F P V T E G P A A S R L H E F F L H Q F C D A H S C T G N R K P F S R G R R K K T N V F Y I F V S I L L V I L L L
 
AT5G40710.1     L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
gm049063_Glyma1    L Y Y L Y I Y L Y Q R G M K R E T Q V L K R V S Q A S R K K K P S
 
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