fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049063 not found in 268aa AT5G63280.1 1st_not 0.575815738 II
Gm023092 not found in 271aa AT5G63280.1 not_not 0.545105566 III
Gm034844 not found in 282aa AT5G63280.1 not_not 0.523992322 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40710.1     ---MGRSNSQCPSHWILLCFFISSQFWG--------------FSLPTSIIQQNLEGFKDP
gm034844_Glyma1 ---MKKAT------RIVSIFVISMLCFQELIHVSSSPFLYAHQVYEESSGGRNLKQEQEQ
gm049063_Glyma1 ---MWLSD-----HRLFLLCIVCGLYFS--------------LQFTTGHADSNAGRTLNQ
gm023092_Glyma0 MKKMWVSD-----HRLFLLCILCGLCFC--------------LQFTTGHAGSNAGRTLNQ
                   *  :        :.   .:.   :                    .    *     : 

AT5G40710.1     EDGF-HEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRS
gm034844_Glyma1 EQKHAQEVHCSRERSRAARKVIEEYLTPFMERENYQLSSKCKLHPENDIFTDQEEHKIYI
gm049063_Glyma1 EGGD-HQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEQHKFHT
gm023092_Glyma0 EGGD-HQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHI
                *    :::********.* *:*:*** *::*:*.*::.. * :* :***: :**:**   

AT5G40710.1     DINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKS
gm034844_Glyma1 DRHEWRCGYCKKSFREEKFLDQHFDSRHYNFLNLSHGKCLGDLCGALHCDAVMNFKSSRS
gm049063_Glyma1 DINEWQCGFCKKSFYEEKHLDQHFDNRHSNLLNLSESQCIADVCGALHCDHEMNSGSKKS
gm023092_Glyma0 DINEWQCRYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKS
                * :**:* :***:* ***.**:***.** *:** *..:*:.*:*******  ::    :*

AT5G40710.1     KCNPAAAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKK
gm034844_Glyma1 KCNPAAAARNRHLCENLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKD
gm049063_Glyma1 KCNPAAAAKNKHLCESLADSCFPVTEGPAASRLHEFFLHQFCDAHSCTGNRKPFSRGRRK
gm023092_Glyma0 KCNPAAAAKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRK
                ********:::****.**:.***:..*.:*.:**::**:******:*:*  **:*:  :.

AT5G40710.1     RSIVYIIF-SIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
gm034844_Glyma1 QSSFFRLAAGALILVLLPVFYLFLYLVQSDVKSRTQELRRISKAGWKSKPS
gm049063_Glyma1 KTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRVSQASRKKKPS
gm023092_Glyma0 KTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS
                :: .: :  . :::::* ::* ::** : .:* .:* *:*: : . *.**
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     - - - M G R S N S Q C P S H W I L L C F F I S S Q F W G - - - - - - - - - - - - - - F S L P T S I I Q Q N L E G F K D P
gm034844_Glyma1    - - - M K K A T - - - - - - R I V S I F V I S M L C F Q E L I H V S S S P F L Y A H Q V Y E E S S G G R N L K Q E Q E Q
gm049063_Glyma1    - - - M W L S D - - - - - H R L F L L C I V C G L Y F S - - - - - - - - - - - - - - L Q F T T G H A D S N A G R T L N Q
gm023092_Glyma0    M K K M W V S D - - - - - H R L F L L C I L C G L C F C - - - - - - - - - - - - - - L Q F T T G H A G S N A G R T L N Q
 
AT5G40710.1     E D G F - H E I H C S R E R S R V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S
gm034844_Glyma1    E Q K H A Q E V H C S R E R S R A A R K V I E E Y L T P F M E R E N Y Q L S S K C K L H P E N D I F T D Q E E H K I Y I
gm049063_Glyma1    E G G D - H Q I H C S R E R S R T A W K I I Q E Y L M P F V E K E K Y H I S K R C R L H P D N D I Y R D Q E Q H K F H T
gm023092_Glyma0    E G G D - H Q I H C S R E R S R T A W K I I Q E Y L M P F V E K E K Y H I S K R C M L H P D N D I Y R D Q E Q H K S H I
 
AT5G40710.1     D I N E W R C G F C K K A F Y E E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R L K S
gm034844_Glyma1    D R H E W R C G Y C K K S F R E E K F L D Q H F D S R H Y N F L N L S H G K C L G D L C G A L H C D A V M N F K S S R S
gm049063_Glyma1    D I N E W Q C G F C K K S F Y E E K H L D Q H F D N R H S N L L N L S E S Q C I A D V C G A L H C D H E M N S G S K K S
gm023092_Glyma0    D I N E W Q C R Y C K K S F Y E E K H L D Q H F D N R H S N L L N L S E S Q C L A D V C G A L H C D H E M N S G S K K S
 
AT5G40710.1     K C N P A A A A K N R H L C E S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K P K K
gm034844_Glyma1    K C N P A A A A R N R H L C E N L A D N C F P I S E G P S A G R L H E L F L H Q F C D A H T C S G K H K P F S R G G K D
gm049063_Glyma1    K C N P A A A A K N K H L C E S L A D S C F P V T E G P A A S R L H E F F L H Q F C D A H S C T G N R K P F S R G R R K
gm023092_Glyma0    K C N P A A A A K H K H L C E S L A D S C F P V S D G P A A S Q L H E F F L H Q F C D A H S C T G S R K P F S R G H R K
 
AT5G40710.1     R S I V Y I I F - S I I V L V V L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
gm034844_Glyma1    Q S S F F R L A A G A L I L V L L P V F Y L F L Y L V Q S D V K S R T Q E L R R I S K A G W K S K P S
gm049063_Glyma1    K T N V F Y I F V S I L L V I L L L L Y Y L Y I Y L Y Q R G M K R E T Q V L K R V S Q A S R K K K P S
gm023092_Glyma0    K T N V F Y I F V S I L L V I L L L L Y Y L Y I Y L Y Q R G M K R E T Q V L K R I S Q A S R K K K P S
 
0