fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G41020.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026916 LFDFVNLDLRLKAFEE in 396/538 AT5G41020.1 1st_1st 0.478054567 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G41020.1     MAEEKKNKKKKSDAKVDSEETGEEFISEHSSMKDKEKKRKKNKRENKDGFTGEDMEITGR
pt026916_POPTR_ MVGGKQRGKKKT-----KDEDGS--LKEESSLKDR---------------------LLAS
                *.  *:. ***:     .:* *.  :.*.**:**:                     : . 

AT5G41020.1     ESEKLGDEVFIVKKKKKSKKPIRIDSEAVDAVKKKSKKRSKETKADSEAEDDGVEKKSKE
pt026916_POPTR_ GGESLTPSIEIMK-------------------KKKTRRRSE--KHEASAEDVGVSSSLSE
                 .*.*  .: *:*                   ***:::**:  * ::.*** **... .*

AT5G41020.1     KSKETKVDSEAHDGVKRKKKKSKKESGGD---VIENTESSKVSDKKKGKRKRDDTDLGAE
pt026916_POPTR_ GNVDVNNAADKNERKKKKKEKKKKKSEGHGDCSIANMNNGEGRDRKKEKKKKQKKYGGG-
                 . :.:  :: ::  *:**:*.**:* *.    * * :..:  *:** *:*::..  *. 

AT5G41020.1     ENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAK
pt026916_POPTR_ -GGDTEVIESAADGKDAGREESTEIVQDKVESSKKEKKKKKKRHNVVNDEGG--------
                 . *.** ..  . * :  .:  :*  *..:..**::****: .:  .:*.*        

AT5G41020.1     KRRKKKKKKKQSEVSEAEEKSDK------SDEDLTTPS------TSSKRVKFSDQVEFFP
pt026916_POPTR_ ---KKRKKKAKSLGNGSKEKSSKRVTQMEKDVETTGPSEKSSSKATSKRVSFCEDVEVFP
                   **:*** :*  . ::***.*      .* : * **      ::****.*.::**.**

AT5G41020.1     SDD---DEGTEDDDEEEVKVVRGKRFTKEEDEMVKNAVLEYIDNHALGDEGIKMVMECKA
pt026916_POPTR_ SSDGPSDEKAVGED----GLVRGKRFSHEEDEMVKEAVLNYIDVHGLGAEGLNMVLNCKK
                *.*   ** : .:*     :******::*******:***:*** *.** **::**::** 

AT5G41020.1     YPQLKGCWKEITSALPWRTYNSVYHRAHTIFEAGSQGIWTKEDIELVMEFQKTHGNDWKT
pt026916_POPTR_ HPAIVHCWKEIGAALPWRPRQSVYHRAHILFERGQNSSWTPEEYELIRKFHEKHGSDWKT
                :* :  ***** :*****. :******* :** *.:. ** *: **: :*::.**.****

AT5G41020.1     LADAMGKHRKHVKDAWRRGRLAGKKKGHWMREEYQNLFDLVNKDLRMKAFKEKHSKHGML
pt026916_POPTR_ LAEALGKHRFHVKDTWRRIKLINMKKGKWSQDEYQSLFDFVNLDLRLKAFEERKTKHGML
                **:*:**** ****:*** :* . ***:* ::***.***:** ***:***:*:::*****

AT5G41020.1     KDNIPWMAISDVLETRDHVTCCQKWYEQLISPMVAKGMWANVDDYRLLEELLKLDAACID
pt026916_POPTR_ RDNISWTAISERLETRTDALCCQKWYDQLTSPMVAEGKWLDTDDYRLLMELYDLDACCME
                :***.* ***: **** .. ******:** *****:* * :.****** ** .***.*::

AT5G41020.1     DVDWDNLLENRDGEACRKRWNQMIIHIGVPKSKTFAEQVEILSDRYCPDIAEDREDFDNR
pt026916_POPTR_ DVDWDNLLEHRSGDLCRKRWNQMVKHLGDHRNKSFADQVDVLIKRYCPDVLEAREAYNSK
                *********:*.*: ********: *:*  :.*:**:**::* .*****: * ** ::.:

AT5G41020.1     PYDPED
pt026916_POPTR_ PAVP--
                *  *
BoxShade v3.31 C (beta, 970507) Output
AT5G41020.1     M A E E K K N K K K K S D A K V D S E E T G E E F I S E H S S M K D K E K K R K K N K R E N K D G F T G E D M E I T G R
pt026916_POPTR_    M V G G K Q R G K K K T - - - - - K D E D G S - - L K E E S S L K D R - - - - - - - - - - - - - - - - - - - - - L L A S
 
AT5G41020.1     E S E K L G D E V F I V K K K K K S K K P I R I D S E A V D A V K K K S K K R S K E T K A D S E A E D D G V E K K S K E
pt026916_POPTR_    G G E S L T P S I E I M K - - - - - - - - - - - - - - - - - - - K K K T R R R S E - - K H E A S A E D V G V S S S L S E
 
AT5G41020.1     K S K E T K V D S E A H D G V K R K K K K S K K E S G G D - - - V I E N T E S S K V S D K K K G K R K R D D T D L G A E
pt026916_POPTR_    G N V D V N N A A D K N E R K K K K K E K K K K K S E G H G D C S I A N M N N G E G R D R K K E K K K K Q K K Y G G G -
 
AT5G41020.1     E N I D K E V K R K N N K K K P S V D S D V E D I N L D S T N D G K K K R K K K K Q S E D S E T E E N G L N S T K D A K
pt026916_POPTR_    - G G D T E V I E S A A D G K D A G R E E S T E I V Q D K V E S S K K E K K K K K K R H N V V N D E G G - - - - - - - -
 
AT5G41020.1     K R R K K K K K K K Q S E V S E A E E K S D K - - - - - - S D E D L T T P S - - - - - - T S S K R V K F S D Q V E F F P
pt026916_POPTR_    - - - K K R K K K A K S L G N G S K E K S S K R V T Q M E K D V E T T G P S E K S S S K A T S K R V S F C E D V E V F P
 
AT5G41020.1     S D D - - - D E G T E D D D E E E V K V V R G K R F T K E E D E M V K N A V L E Y I D N H A L G D E G I K M V M E C K A
pt026916_POPTR_    S S D G P S D E K A V G E D - - - - G L V R G K R F S H E E D E M V K E A V L N Y I D V H G L G A E G L N M V L N C K K
 
AT5G41020.1     Y P Q L K G C W K E I T S A L P W R T Y N S V Y H R A H T I F E A G S Q G I W T K E D I E L V M E F Q K T H G N D W K T
pt026916_POPTR_    H P A I V H C W K E I G A A L P W R P R Q S V Y H R A H I L F E R G Q N S S W T P E E Y E L I R K F H E K H G S D W K T
 
AT5G41020.1     L A D A M G K H R K H V K D A W R R G R L A G K K K G H W M R E E Y Q N L F D L V N K D L R M K A F K E K H S K H G M L
pt026916_POPTR_    L A E A L G K H R F H V K D T W R R I K L I N M K K G K W S Q D E Y Q S L F D F V N L D L R L K A F E E R K T K H G M L
 
AT5G41020.1     K D N I P W M A I S D V L E T R D H V T C C Q K W Y E Q L I S P M V A K G M W A N V D D Y R L L E E L L K L D A A C I D
pt026916_POPTR_    R D N I S W T A I S E R L E T R T D A L C C Q K W Y D Q L T S P M V A E G K W L D T D D Y R L L M E L Y D L D A C C M E
 
AT5G41020.1     D V D W D N L L E N R D G E A C R K R W N Q M I I H I G V P K S K T F A E Q V E I L S D R Y C P D I A E D R E D F D N R
pt026916_POPTR_    D V D W D N L L E H R S G D L C R K R W N Q M V K H L G D H R N K S F A D Q V D V L I K R Y C P D V L E A R E A Y N S K
 
AT5G41020.1     P Y D P E D
pt026916_POPTR_    P A V P - -
 
0