fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G41920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000890 KRTIDNLQLSLEPADE in 375/852 AT3G54220.1 1st_not 0.482490272 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G41920.1     -------------MTTK----------------------RIDRDL-------PSSD--DP
pp000890_Pp1s88 MALVCPNPRERLGLVTKEPTGVGSRTHYNVGFPGYRDQLRMTDNLRDPFHSGPETGGRDP
                             :.**                      *:  :*       *.:.  **

AT5G41920.1     SSAKRRIE-------------------------------------FPEET----------
pp000890_Pp1s88 QDAERRGELQEHRVHLPDLDFGVGAKWNCTGQISSWSSYDSTSQSFPSTSAAGWVVSPLG
                ..*:** *                                     **. :          

AT5G41920.1     ------------------------------------------------------------
pp000890_Pp1s88 SNNSPFPSDGSFSDHLSSGLSNTSFPGALPASLQVQSGGSAGGFFSGSTQTASCNGNQLY
                                                                            

AT5G41920.1     ---------------------------------------------------------LEN
pp000890_Pp1s88 QNPPSLMNAAPRDSWGKIEDAPSPHHQLSCQYDMEQHGNYGYGVQPAREAVKDHFSGMDE
                                                                         :::

AT5G41920.1     DGAAA-------------------------------------------------------
pp000890_Pp1s88 DSVAAWVDGMIMEMMEAMPGVPIEQILTNLSEVLAPSNSQLERIIGSRVQSLYGGAGLRV
                *..**                                                       

AT5G41920.1     ------------------------------------------------------------
pp000890_Pp1s88 QTFLHTGPSRFGKRTREGQIGWRNAKSSQNEARAYQDTPSHHHVRPDNFMEQNAVASLAR
                                                                            

AT5G41920.1     ------------------------------------------------------------
pp000890_Pp1s88 DELHYPRPQKRTIDNLQLSLEPADERSLRHLHTAQQPMPEDQYSHQVLRSRDQTTKPVQH
                                                                            

AT5G41920.1     ------------------------------------------------------------
pp000890_Pp1s88 QHYFQPHLQHQQQKSGEIQNDFSPPSNAAQYPILNTRGFNDAVSLPQNVPQSTPRNAQPE
                                                                            

AT5G41920.1     ---------IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQAL
pp000890_Pp1s88 PPNATDEEGLQLLALLLQCAEAVSSDDFDQANSILPQLSELATPYGTSVQRVVAYFAEGM
                         ::**:******* *::*.: :*.::*.::**:.:*:*:* :*******:.:

AT5G41920.1     QTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDG
pp000890_Pp1s88 ASRLV-TYCLGICPPLSSKQL--VSNQSFLSAMQVFNEICPFVKFSHFTANQAIFDAFEG
                 :*:: :*  * *.***.* *  *..*.::**:*.:*.:.*::************:*::*

AT5G41920.1     EDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSL
pp000890_Pp1s88 MFNVHVIDIDIMHGLQWPPLFQLLASRPGGPPHVHITGLGTSIETLEATGKRLTDFAASF
                  .**:**:*:*:*****.**::*****     ::***:*:* : * :**:**:***:*:

AT5G41920.1     NLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNL
pp000890_Pp1s88 NISFEFTAVADKIGN-VDLSTLKVEFSDAVAVHWMHHSLYDVTGSDLNTLNLIEKLNPKV
                *:.*** .: . *** :* * * .. .:**.****:* ******.:*:**:::.:*:*::

AT5G41920.1     ITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNI
pp000890_Pp1s88 ITLVEQDLRH--GGTFLSRFVEALHYYSALFDSLGASYKADSPERHMVEQQLLSCEIKNI
                **:***:* :  **:**.**************:** .   :* **. *** :*. **:**

AT5G41920.1     VAHGG----GRRKRMKWKEELSRVGFRPVSLRGNPATQAGLLL-GMLPWNGYTLVEENGT
pp000890_Pp1s88 LAFGGPARTGEAKFDQWRDELGK-RFKPVSLSGKAAHQAALLLQGLFPCEGYTLLEHRGT
                :*.**    *. *  :*::**.:  *:**** *:.* **.*** *::* :****:*..**

AT5G41920.1     LRLGWKDLSLLTASAWKSQPFD
pp000890_Pp1s88 LKLGWKDLYLFTASAWTNE---
                *:****** *:*****..:
BoxShade v3.31 C (beta, 970507) Output
AT5G41920.1     - - - - - - - - - - - - - M T T K - - - - - - - - - - - - - - - - - - - - - - R I D R D L - - - - - - - P S S D - - D P
pp000890_Pp1s88    M A L V C P N P R E R L G L V T K E P T G V G S R T H Y N V G F P G Y R D Q L R M T D N L R D P F H S G P E T G G R D P
 
AT5G41920.1     S S A K R R I E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P E E T - - - - - - - - - -
pp000890_Pp1s88    Q D A E R R G E L Q E H R V H L P D L D F G V G A K W N C T G Q I S S W S S Y D S T S Q S F P S T S A A G W V V S P L G
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000890_Pp1s88    S N N S P F P S D G S F S D H L S S G L S N T S F P G A L P A S L Q V Q S G G S A G G F F S G S T Q T A S C N G N Q L Y
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L E N
pp000890_Pp1s88    Q N P P S L M N A A P R D S W G K I E D A P S P H H Q L S C Q Y D M E Q H G N Y G Y G V Q P A R E A V K D H F S G M D E
 
AT5G41920.1     D G A A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000890_Pp1s88    D S V A A W V D G M I M E M M E A M P G V P I E Q I L T N L S E V L A P S N S Q L E R I I G S R V Q S L Y G G A G L R V
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000890_Pp1s88    Q T F L H T G P S R F G K R T R E G Q I G W R N A K S S Q N E A R A Y Q D T P S H H H V R P D N F M E Q N A V A S L A R
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000890_Pp1s88    D E L H Y P R P Q K R T I D N L Q L S L E P A D E R S L R H L H T A Q Q P M P E D Q Y S H Q V L R S R D Q T T K P V Q H
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000890_Pp1s88    Q H Y F Q P H L Q H Q Q Q K S G E I Q N D F S P P S N A A Q Y P I L N T R G F N D A V S L P Q N V P Q S T P R N A Q P E
 
AT5G41920.1     - - - - - - - - - I K L L S L L L Q C A E Y V A T D H L R E A S T L L S E I S E I C S P F G S S P E R V V A Y F A Q A L
pp000890_Pp1s88    P P N A T D E E G L Q L L A L L L Q C A E A V S S D D F D Q A N S I L P Q L S E L A T P Y G T S V Q R V V A Y F A E G M
 
AT5G41920.1     Q T R V I S S Y L S G A C S P L S E K P L T V V Q S Q K I F S A L Q T Y N S V S P L I K F S H F T A N Q A I F Q A L D G
pp000890_Pp1s88    A S R L V - T Y C L G I C P P L S S K Q L - - V S N Q S F L S A M Q V F N E I C P F V K F S H F T A N Q A I F D A F E G
 
AT5G41920.1     E D S V H I I D L D V M Q G L Q W P A L F H I L A S R P R K L R S I R I T G F G S S S D L L A S T G R R L A D F A S S L
pp000890_Pp1s88    M F N V H V I D I D I M H G L Q W P P L F Q L L A S R P G G P P H V H I T G L G T S I E T L E A T G K R L T D F A A S F
 
AT5G41920.1     N L P F E F H P I E G I I G N L I D P S Q L A T R Q G E A V V V H W M Q H R L Y D V T G N N L E T L E I L R R L K P N L
pp000890_Pp1s88    N I S F E F T A V A D K I G N - V D L S T L K V E F S D A V A V H W M H H S L Y D V T G S D L N T L N L I E K L N P K V
 
AT5G41920.1     I T V V E Q E L S Y D D G G S F L G R F V E A L H Y Y S A L F D A L G D G L G E E S G E R F T V E Q I V L G T E I R N I
pp000890_Pp1s88    I T L V E Q D L R H - - G G T F L S R F V E A L H Y Y S A L F D S L G A S Y K A D S P E R H M V E Q Q L L S C E I K N I
 
AT5G41920.1     V A H G G - - - - G R R K R M K W K E E L S R V G F R P V S L R G N P A T Q A G L L L - G M L P W N G Y T L V E E N G T
pp000890_Pp1s88    L A F G G P A R T G E A K F D Q W R D E L G K - R F K P V S L S G K A A H Q A A L L L Q G L F P C E G Y T L L E H R G T
 
AT5G41920.1     L R L G W K D L S L L T A S A W K S Q P F D
pp000890_Pp1s88    L K L G W K D L Y L F T A S A W T N E - - -
 
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