fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G41920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028374 not found in 711aa AT3G54220.1 1st_not 0.500648508 II
Sb006611 not found in 268aa AT5G41920.1 not_1st 0.420233463 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G41920.1     MTTKRI--DRDLPS---------SD-----------DPSSA-------------------
Sb006611_Sorbi1 ------------------------------------------------------------
Sb028374_Sorbi1 MVRKRPAQDMDLPPPRRHVTGDLSDVTAAAAGSGGAPPSSASAQLPALPTQLHQLPPAFQ
                                                                            

AT5G41920.1     ------------------------------------------------------------
Sb006611_Sorbi1 ------------------------------------------------------------
Sb028374_Sorbi1 HHAAEVGVPVPAPPPPPPNTAAHAQAGGEAAASTTAWVDGIIRDIIGSSGGAAVSITQLI
                                                                            

AT5G41920.1     --------------------------------KRRIEFP---------------------
Sb006611_Sorbi1 ------------------------------------------------------------
Sb028374_Sorbi1 HNPSQQHALLHGVGAPAAAAGLTLPPPPPLQDKRRHEPPPPPPPPQQQQQEEPHPASQSP
                                                                            

AT5G41920.1     -----EETLENDGAAA-----------------------IKLLSLLLQCAEYVATDHLRE
Sb006611_Sorbi1 ------------------------------------------------------------
Sb028374_Sorbi1 KAPTAEETAAAAAAAAAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCAEAVNADNLDD
                                                                            

AT5G41920.1     ASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLSE-KPLTVVQSQKI
Sb006611_Sorbi1 ------------------------------------------------------------
Sb028374_Sorbi1 AHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCL-GLYAPLPPGTPAAARLHGRV
                                                                            

AT5G41920.1     FSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPR
Sb006611_Sorbi1 ------------------------------------------MQGLQWPGLFHILASRPR
Sb028374_Sorbi1 AAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPG
                                                          *******.********* 

AT5G41920.1     KLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQL-------
Sb006611_Sorbi1 KPRSLRITGLGASLDVLEATGRRLADFAASLGLPFEFHPIEGKIGHVADAAALLGSRQHQ
Sb028374_Sorbi1 GPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNV-DPEKL-------
                    :*:**:*:* : * :**:**:*** :*.***** .:    *:: *.  *       

AT5G41920.1     -ATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFV
Sb006611_Sorbi1 NQQRDDEATVVHWMHHCLYDVTGSDVGTVRLLRSLRPKLITIVEQDLGHS--GDFLGRFV
Sb028374_Sorbi1 GVTRR-EAVAVHWLHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHS--GSFLARFV
                   *  **..***::* ******.:  *: ::: * *:::*:***:*.:.  *.**.***

AT5G41920.1     EALHYYSALFDALGDGLG---EESGERFTVEQIVLGTEIRNIVAHGGGRR----KRMKWK
Sb006611_Sorbi1 EALHYYSALFDALGDGAGAAEEESAERYAVERQLLGAEIRNIVAVGGPKRTGEVRVERWG
Sb028374_Sorbi1 EAIHYYSALFDSLDASYG---EDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWR
                **:********:*. . *   *:* **..**: :*. ****::* **  *    :   * 

AT5G41920.1     EELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWKSQ
Sb006611_Sorbi1 DELRRAGFRPVSLAGSPATQARLLLGMYPWKGYTLVEEDACLRLGWKDLSLLTASAW--E
Sb028374_Sorbi1 EKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAW--R
                ::* : ***..** *..*:** ***** * .*******:. *:******.*******  .

AT5G41920.1     PFD-----------
Sb006611_Sorbi1 PADDAAASAPTTTS
Sb028374_Sorbi1 PIQ-----MPPCR-
                * :
BoxShade v3.31 C (beta, 970507) Output
AT5G41920.1     M T T K R I - - D R D L P S - - - - - - - - - S D - - - - - - - - - - - D P S S A - - - - - - - - - - - - - - - - - - -
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb028374_Sorbi1    M V R K R P A Q D M D L P P P R R H V T G D L S D V T A A A A G S G G A P P S S A S A Q L P A L P T Q L H Q L P P A F Q
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb028374_Sorbi1    H H A A E V G V P V P A P P P P P P N T A A H A Q A G G E A A A S T T A W V D G I I R D I I G S S G G A A V S I T Q L I
 
AT5G41920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R R I E F P - - - - - - - - - - - - - - - - - - - - -
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb028374_Sorbi1    H N P S Q Q H A L L H G V G A P A A A A G L T L P P P P P L Q D K R R H E P P P P P P P P Q Q Q Q Q E E P H P A S Q S P
 
AT5G41920.1     - - - - - E E T L E N D G A A A - - - - - - - - - - - - - - - - - - - - - - - I K L L S L L L Q C A E Y V A T D H L R E
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb028374_Sorbi1    K A P T A E E T A A A A A A A A A A A A A A A K E R K E E Q R R K Q R D E E G L H L L T L L L Q C A E A V N A D N L D D
 
AT5G41920.1     A S T L L S E I S E I C S P F G S S P E R V V A Y F A Q A L Q T R V I S S Y L S G A C S P L S E - K P L T V V Q S Q K I
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb028374_Sorbi1    A H Q T L L E I A E L A T P F G T S T Q R V A A Y F A E A M S A R L V S S C L - G L Y A P L P P G T P A A A R L H G R V
 
AT5G41920.1     F S A L Q T Y N S V S P L I K F S H F T A N Q A I F Q A L D G E D S V H I I D L D V M Q G L Q W P A L F H I L A S R P R
Sb006611_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q G L Q W P G L F H I L A S R P R
Sb028374_Sorbi1    A A A F Q V F N G I S P F V K F S H F T A N Q A I Q E A F E R E E R V H I I D L D I M Q G L Q W P G L F H I L A S R P G
 
AT5G41920.1     K L R S I R I T G F G S S S D L L A S T G R R L A D F A S S L N L P F E F H P I E G I I G N L I D P S Q L - - - - - - -
Sb006611_Sorbi1    K P R S L R I T G L G A S L D V L E A T G R R L A D F A A S L G L P F E F H P I E G K I G H V A D A A A L L G S R Q H Q
Sb028374_Sorbi1    G P P R V R L T G L G A S M E A L E A T G K R L S D F A D T L G L P F E F C A V A E K A G N V - D P E K L - - - - - - -
 
AT5G41920.1     - A T R Q G E A V V V H W M Q H R L Y D V T G N N L E T L E I L R R L K P N L I T V V E Q E L S Y D D G G S F L G R F V
Sb006611_Sorbi1    N Q Q R D D E A T V V H W M H H C L Y D V T G S D V G T V R L L R S L R P K L I T I V E Q D L G H S - - G D F L G R F V
Sb028374_Sorbi1    G V T R R - E A V A V H W L H H S L Y D V T G S D S N T L W L I Q R L A P K V V T M V E Q D L S H S - - G S F L A R F V
 
AT5G41920.1     E A L H Y Y S A L F D A L G D G L G - - - E E S G E R F T V E Q I V L G T E I R N I V A H G G G R R - - - - K R M K W K
Sb006611_Sorbi1    E A L H Y Y S A L F D A L G D G A G A A E E E S A E R Y A V E R Q L L G A E I R N I V A V G G P K R T G E V R V E R W G
Sb028374_Sorbi1    E A I H Y Y S A L F D S L D A S Y G - - - E D S P E R H V V E Q Q L L S R E I R N V L A V G G P A R T G D V K F G S W R
 
AT5G41920.1     E E L S R V G F R P V S L R G N P A T Q A G L L L G M L P W N G Y T L V E E N G T L R L G W K D L S L L T A S A W K S Q
Sb006611_Sorbi1    D E L R R A G F R P V S L A G S P A T Q A R L L L G M Y P W K G Y T L V E E D A C L R L G W K D L S L L T A S A W - - E
Sb028374_Sorbi1    E K L A Q S G F R A A S L A G S A A A Q A S L L L G M F P S D G Y T L V E E N G A L K L G W K D L C L L T A S A W - - R
 
AT5G41920.1     P F D - - - - - - - - - - -
Sb006611_Sorbi1    P A D D A A A S A P T T T S
Sb028374_Sorbi1    P I Q - - - - - M P P C R -
 
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