fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G41920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030383 not found in 442aa AT5G41920.1 1st_1st 0.660181582 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G41920.1     -----------------MTTKR-IDR--DLPSSDDPSSAKRRIEFPEETLENDGAAA---
gm030383_Glyma1 MLQSLVPRSPRTSNPNAMKTKRAVDAGGDSP-ADEPSFKRTNFSGEKTTAEAEEEQAFDP
                                 *.*** :*   * * :*:**  : .:.  : * * :   *   

AT5G41920.1     ---------IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQAL
gm030383_Glyma1 EPHGGDSTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPYGTSPERVGAYFAQAL
                         :***.******* ** *:*  *. **.**:*:.**:*:***** *******

AT5G41920.1     QTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDG
gm030383_Glyma1 QARVVSSCI-GSYSPLTAKSVTLTQSQKIFNAFQSYNSVSPLVKFSHFTANQAIFQALDG
                *:**:** : *: ***: *.:*:.******.*:*:*******:*****************

AT5G41920.1     EDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSL
gm030383_Glyma1 EDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLDSTGRRLADFASSL
                ** *******:*******.********.:*:**:*********:** *************

AT5G41920.1     NLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNL
gm030383_Glyma1 GLPFEFFPVEGKIGSVTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKL
                .*****.*:** **.: : ***..* .**:*****:* ***:**.:* **.:* :*:*:*

AT5G41920.1     ITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNI
gm030383_Glyma1 ITTVEQDLSH--AGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQHLLGCEIRNI
                **.***:**:  .****.********************* :* **.**** :** *****

AT5G41920.1     VAHGGGRR----KRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTL
gm030383_Glyma1 VAVGGPKRTGEVKLERWGDELKRAGFGPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSL
                ** ** :*    *  :* :**.*.** *********:**.*****:**.*********:*

AT5G41920.1     RLGWKDLSLLTASAWKSQPFD-------
gm030383_Glyma1 KLGWKDLSLLIASAW--QPSDLMITYPD
                :********* ****  ** *
BoxShade v3.31 C (beta, 970507) Output
AT5G41920.1     - - - - - - - - - - - - - - - - - M T T K R - I D R - - D L P S S D D P S S A K R R I E F P E E T L E N D G A A A - - -
gm030383_Glyma1    M L Q S L V P R S P R T S N P N A M K T K R A V D A G G D S P - A D E P S F K R T N F S G E K T T A E A E E E Q A F D P
 
AT5G41920.1     - - - - - - - - - I K L L S L L L Q C A E Y V A T D H L R E A S T L L S E I S E I C S P F G S S P E R V V A Y F A Q A L
gm030383_Glyma1    E P H G G D S T G L K L L G L L L Q C A E C V A M D N L D F A N D L L P E I A E L S S P Y G T S P E R V G A Y F A Q A L
 
AT5G41920.1     Q T R V I S S Y L S G A C S P L S E K P L T V V Q S Q K I F S A L Q T Y N S V S P L I K F S H F T A N Q A I F Q A L D G
gm030383_Glyma1    Q A R V V S S C I - G S Y S P L T A K S V T L T Q S Q K I F N A F Q S Y N S V S P L V K F S H F T A N Q A I F Q A L D G
 
AT5G41920.1     E D S V H I I D L D V M Q G L Q W P A L F H I L A S R P R K L R S I R I T G F G S S S D L L A S T G R R L A D F A S S L
gm030383_Glyma1    E D R V H I I D L D I M Q G L Q W P G L F H I L A S R S K K I R S V R I T G F G S S S E L L D S T G R R L A D F A S S L
 
AT5G41920.1     N L P F E F H P I E G I I G N L I D P S Q L A T R Q G E A V V V H W M Q H R L Y D V T G N N L E T L E I L R R L K P N L
gm030383_Glyma1    G L P F E F F P V E G K I G S V T E L S Q L G V R P N E A I V V H W M H H C L Y D I T G S D L G T L R L L T Q L R P K L
 
AT5G41920.1     I T V V E Q E L S Y D D G G S F L G R F V E A L H Y Y S A L F D A L G D G L G E E S G E R F T V E Q I V L G T E I R N I
gm030383_Glyma1    I T T V E Q D L S H - - A G S F L A R F V E A L H Y Y S A L F D A L G D G L G A D S L E R H T V E Q H L L G C E I R N I
 
AT5G41920.1     V A H G G G R R - - - - K R M K W K E E L S R V G F R P V S L R G N P A T Q A G L L L G M L P W N G Y T L V E E N G T L
gm030383_Glyma1    V A V G G P K R T G E V K L E R W G D E L K R A G F G P V S L R G N P A A Q A S L L L G M F P W R G Y T L V E E N G S L
 
AT5G41920.1     R L G W K D L S L L T A S A W K S Q P F D - - - - - - -
gm030383_Glyma1    K L G W K D L S L L I A S A W - - Q P S D L M I T Y P D
 
1