fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42630.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048045 not found in 331aa AT5G42630.1 1st_not 0.437823834 II
Pt016715 not found in 302aa AT5G42630.1 1st_not 0.461139896 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42630.2     MMMLESRNS----MRASNSVPDLSLQISLPNYHAGKPLHG----------GDRSSTSSDS
pt016715_POPTR_ -MFSSSKHI---IMRSVSPFPDLSLQISPPSVEAKETGYD-GGLTRKALCSDRSST-TDS
gm048045_Glyma1 -MFTNSQTVMQTLLSSPSAEPDLSLNISPPSISDSEAAKDVVGSFGKVLYSDICST-SDS
                 *: .*:      : : .. *****:** *.    :.  .          .* .** :**

AT5G42630.2     GSS-LSDLSHENNFFN-------------KPLLSLGFD-------------------HHH
pt016715_POPTR_ GSS-GSDLSHENGFLNQERSYNLG---PSEPTLSLGFDMADLSS---QTLQLPRNLNHHH
gm048045_Glyma1 GSSGGSDLSHE--------FHNLGHHHHREPTLKLGFGTVDLNPHHHQVQGVPRSFNHHH
                ***  ******                  :* *.***.                   ***

AT5G42630.2     QRRSNMFQPQIYGRDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATP
pt016715_POPTR_ H------QPQIYGRDFKRSARMINGVKRSVRAPRMRWTTTLHAHFVHAVRLLGGHERATP
gm048045_Glyma1 HL----LQPHIYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATP
                :      **:*********:  : *:***:********:**********:**********

AT5G42630.2     KSVLELMNVKDLTLAHVKSHLQMYRTVKCTDKG-----SPGEGKVEKE------------
pt016715_POPTR_ KSVLELMNVKDLTLAHVKSHLQMYRTVKSTDRGPGKLYCLSSGKADAN------------
gm048045_Glyma1 KSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKG---ISTAGHGQTDIGLNPRLGINVHLH
                ****************************.**:*       . *:.:              

AT5G42630.2     --------------------------------------AEQRI-----------EDNNNN
pt016715_POPTR_ ---------NLPQPLNNPPPSPPPPPLSSTQKNQRSLGDEKNISSLEALTYVN-------
gm048045_Glyma1 APSPICDTPNLPDPIQNSQRTPWQSSIETKTDNSRQ--EEPEI----GLTYSHLKGNNNN
                                                       * .*                 

AT5G42630.2     EE--ADEGTDTNSPNSSSVQKTQRLLFIYIFIFVK-----------------FCI
pt016715_POPTR_ ----VEAHDHSKRLDSSS-SSSSDMLLNLEFTLGRPSWQLDYAETTNELTLLKC-
gm048045_Glyma1 NETMVDGHNNSGGLDSSPLSRSSEAMLDLEFTLGRPNWQKDHPESSRELTLLKC-
                    .:   .:   :**. . :.  ::   * : :                  *
BoxShade v3.31 C (beta, 970507) Output
AT5G42630.2     M M M L E S R N S - - - - M R A S N S V P D L S L Q I S L P N Y H A G K P L H G - - - - - - - - - - G D R S S T S S D S
pt016715_POPTR_    - M F S S S K H I - - - I M R S V S P F P D L S L Q I S P P S V E A K E T G Y D - G G L T R K A L C S D R S S T - T D S
gm048045_Glyma1    - M F T N S Q T V M Q T L L S S P S A E P D L S L N I S P P S I S D S E A A K D V V G S F G K V L Y S D I C S T - S D S
 
AT5G42630.2     G S S - L S D L S H E N N F F N - - - - - - - - - - - - - K P L L S L G F D - - - - - - - - - - - - - - - - - - - H H H
pt016715_POPTR_    G S S - G S D L S H E N G F L N Q E R S Y N L G - - - P S E P T L S L G F D M A D L S S - - - Q T L Q L P R N L N H H H
gm048045_Glyma1    G S S G G S D L S H E - - - - - - - - F H N L G H H H H R E P T L K L G F G T V D L N P H H H Q V Q G V P R S F N H H H
 
AT5G42630.2     Q R R S N M F Q P Q I Y G R D F K R S S S S M V G L K R S I R A P R M R W T S T L H A H F V H A V Q L L G G H E R A T P
pt016715_POPTR_    H - - - - - - Q P Q I Y G R D F K R S A R M I N G V K R S V R A P R M R W T T T L H A H F V H A V R L L G G H E R A T P
gm048045_Glyma1    H L - - - - L Q P H I Y G R D F K R S A R V V N G V K R S V R A P R M R W T T T L H A H F V H A V Q L L G G H E R A T P
 
AT5G42630.2     K S V L E L M N V K D L T L A H V K S H L Q M Y R T V K C T D K G - - - - - S P G E G K V E K E - - - - - - - - - - - -
pt016715_POPTR_    K S V L E L M N V K D L T L A H V K S H L Q M Y R T V K S T D R G P G K L Y C L S S G K A D A N - - - - - - - - - - - -
gm048045_Glyma1    K S V L E L M N V K D L T L A H V K S H L Q M Y R T V K S T D K G - - - I S T A G H G Q T D I G L N P R L G I N V H L H
 
AT5G42630.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A E Q R I - - - - - - - - - - - E D N N N N
pt016715_POPTR_    - - - - - - - - - N L P Q P L N N P P P S P P P P P L S S T Q K N Q R S L G D E K N I S S L E A L T Y V N - - - - - - -
gm048045_Glyma1    A P S P I C D T P N L P D P I Q N S Q R T P W Q S S I E T K T D N S R Q - - E E P E I - - - - G L T Y S H L K G N N N N
 
AT5G42630.2     E E - - A D E G T D T N S P N S S S V Q K T Q R L L F I Y I F I F V K - - - - - - - - - - - - - - - - - F C I
pt016715_POPTR_    - - - - V E A H D H S K R L D S S S - S S S S D M L L N L E F T L G R P S W Q L D Y A E T T N E L T L L K C -
gm048045_Glyma1    N E T M V D G H N N S G G L D S S P L S R S S E A M L D L E F T L G R P N W Q K D H P E S S R E L T L L K C -
 
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