fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42630.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037856 not found in 211aa AT5G42630.1 not_not 0.445595854 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42630.2     MMMLESRNSMRASNSVPDLSLQISLPNYHAGKPL--HGG--------DRSSTSSDSGSSL
pt037856_POPTR_ --------MMRAASPFPYLSLQISPPAVLEAKETGDDGGLARKALCKDRSS-ATDSGSSG
                         ***:...* ****** *    .*    .**        **** ::***** 

AT5G42630.2     SDLSHENNFFN-----------KPLLSLGFD------------------HHHQRRSNMFQ
pt037856_POPTR_ SDLSHENGLFNQDRIAYNLGPSQPTLSLGFDMADLSSPSFQLPRNLNHLHHH-------N
                *******.:**           :* ******                  ***       :

AT5G42630.2     PQIYGRDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMN
pt037856_POPTR_ PQIYGGDFKRSARMISGVRRSKRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMN
                ***** *****:  : *::** ********:*****************************

AT5G42630.2     VKDLTLAHVKSHLQMYRTVKCTDKGSPGEGKVEKEAEQRIEDNNNNEEADEGTDTNSPNS
pt037856_POPTR_ VKDLTLAHVKSHLQMYRTVKSTDKGS-GQGQTDMGLNQR---------------------
                ********************.***** *:*:.:   :**                     

AT5G42630.2     SSVQKTQRLLFIYIFIFVKFCI
pt037856_POPTR_ ------ARILEVDAA-------
                       *:* :
BoxShade v3.31 C (beta, 970507) Output
AT5G42630.2     M M M L E S R N S M R A S N S V P D L S L Q I S L P N Y H A G K P L - - H G G - - - - - - - - D R S S T S S D S G S S L
pt037856_POPTR_    - - - - - - - - M M R A A S P F P Y L S L Q I S P P A V L E A K E T G D D G G L A R K A L C K D R S S - A T D S G S S G
 
AT5G42630.2     S D L S H E N N F F N - - - - - - - - - - - K P L L S L G F D - - - - - - - - - - - - - - - - - - H H H Q R R S N M F Q
pt037856_POPTR_    S D L S H E N G L F N Q D R I A Y N L G P S Q P T L S L G F D M A D L S S P S F Q L P R N L N H L H H H - - - - - - - N
 
AT5G42630.2     P Q I Y G R D F K R S S S S M V G L K R S I R A P R M R W T S T L H A H F V H A V Q L L G G H E R A T P K S V L E L M N
pt037856_POPTR_    P Q I Y G G D F K R S A R M I S G V R R S K R A P R M R W T T T L H A H F V H A V Q L L G G H E R A T P K S V L E L M N
 
AT5G42630.2     V K D L T L A H V K S H L Q M Y R T V K C T D K G S P G E G K V E K E A E Q R I E D N N N N E E A D E G T D T N S P N S
pt037856_POPTR_    V K D L T L A H V K S H L Q M Y R T V K S T D K G S - G Q G Q T D M G L N Q R - - - - - - - - - - - - - - - - - - - - -
 
AT5G42630.2     S S V Q K T Q R L L F I Y I F I F V K F C I
pt037856_POPTR_    - - - - - - A R I L E V D A A - - - - - - -
 
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