fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42630.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016715 not found in 302aa AT5G42630.1 1st_not 0.461139896 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42630.2     MMMLESRN-SMRASNSVPDLSLQISLPNYHAGKPLHGG---------DRSSTSSDSGSSL
pt016715_POPTR_ -MFSSSKHIIMRSVSPFPDLSLQISPPSVEAKETGYDGGLTRKALCSDRSST-TDSGSSG
                 *: .*::  **: ...******** *. .* :. :.*         ***** :***** 

AT5G42630.2     SDLSHENNFFNK----------PLLSLGFD----------------HHHQRRSNMFQPQI
pt016715_POPTR_ SDLSHENGFLNQERSYNLGPSEPTLSLGFDMADLSSQTLQLPRNLNHHHH------QPQI
                *******.*:*:          * ******                ***:      ****

AT5G42630.2     YGRDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKD
pt016715_POPTR_ YGRDFKRSARMINGVKRSVRAPRMRWTTTLHAHFVHAVRLLGGHERATPKSVLELMNVKD
                ********:  : *:***:********:**********:*********************

AT5G42630.2     LTLAHVKSHLQMYRTVKCTDKGSPGEGKVEKEAEQRIEDNNNNEEADEGTDTNSPNS---
pt016715_POPTR_ LTLAHVKSHLQMYRTVKSTDRGP---GKLYCLSSGKADANNLPQPLN-----NPPPSPPP
                *****************.**:*.   **:   :. : : **  :  :     *.* *   

AT5G42630.2     ---SSVQKTQRLL-----------FIYI---------------------FIFVKFCI---
pt016715_POPTR_ PPLSSTQKNQRSLGDEKNISSLEALTYVNVEAHDHSKRLDSSSSSSSDMLLNLEFTLGRP
                   **.**.** *           : *:                     :: ::* :   

AT5G42630.2     ------------------
pt016715_POPTR_ SWQLDYAETTNELTLLKC
BoxShade v3.31 C (beta, 970507) Output
AT5G42630.2     M M M L E S R N - S M R A S N S V P D L S L Q I S L P N Y H A G K P L H G G - - - - - - - - - D R S S T S S D S G S S L
pt016715_POPTR_    - M F S S S K H I I M R S V S P F P D L S L Q I S P P S V E A K E T G Y D G G L T R K A L C S D R S S T - T D S G S S G
 
AT5G42630.2     S D L S H E N N F F N K - - - - - - - - - - P L L S L G F D - - - - - - - - - - - - - - - - H H H Q R R S N M F Q P Q I
pt016715_POPTR_    S D L S H E N G F L N Q E R S Y N L G P S E P T L S L G F D M A D L S S Q T L Q L P R N L N H H H H - - - - - - Q P Q I
 
AT5G42630.2     Y G R D F K R S S S S M V G L K R S I R A P R M R W T S T L H A H F V H A V Q L L G G H E R A T P K S V L E L M N V K D
pt016715_POPTR_    Y G R D F K R S A R M I N G V K R S V R A P R M R W T T T L H A H F V H A V R L L G G H E R A T P K S V L E L M N V K D
 
AT5G42630.2     L T L A H V K S H L Q M Y R T V K C T D K G S P G E G K V E K E A E Q R I E D N N N N E E A D E G T D T N S P N S - - -
pt016715_POPTR_    L T L A H V K S H L Q M Y R T V K S T D R G P - - - G K L Y C L S S G K A D A N N L P Q P L N - - - - - N P P P S P P P
 
AT5G42630.2     - - - S S V Q K T Q R L L - - - - - - - - - - - F I Y I - - - - - - - - - - - - - - - - - - - - - F I F V K F C I - - -
pt016715_POPTR_    P P L S S T Q K N Q R S L G D E K N I S S L E A L T Y V N V E A H D H S K R L D S S S S S S S D M L L N L E F T L G R P
 
AT5G42630.2     - - - - - - - - - - - - - - - - - -
pt016715_POPTR_    S W Q L D Y A E T T N E L T L L K C
 
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