fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42630.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016715 not found in 302aa AT5G42630.1 1st_not 0.461139896 II
Pt037856 not found in 211aa AT5G42630.1 not_not 0.445595854 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42630.2     MMMLESRN-SMRASNSVPDLSLQISLPNY-HAGKPLHGG---------DRSSTSSDSGSS
pt037856_POPTR_ ---------MMRAASPFPYLSLQISPPAVLEAKETGDDGGLARKALCKDRSSA-TDSGSS
pt016715_POPTR_ -MFSSSKHIIMRSVSPFPDLSLQISPPSV-EAKETGYDGGLTRKALCSDRSST-TDSGSS
                          **: ...* ****** *   .* :.  .*         ****: :*****

AT5G42630.2     LSDLSHENNFFNK-----------PLLSLGFD------------------HHHQRRSNMF
pt037856_POPTR_ GSDLSHENGLFNQDRIAYNLGPSQPTLSLGFDMADLSSPSFQLPRNLNHLHHH-------
pt016715_POPTR_ GSDLSHENGFLNQER-SYNLGPSEPTLSLGFDMADLSSQTLQLPRNLNH-HHH-------
                 *******.::*:           * ******                  ***       

AT5G42630.2     QPQIYGRDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELM
pt037856_POPTR_ NPQIYGGDFKRSARMISGVRRSKRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELM
pt016715_POPTR_ QPQIYGRDFKRSARMINGVKRSVRAPRMRWTTTLHAHFVHAVRLLGGHERATPKSVLELM
                :***** *****:  : *::** ********:**********:*****************

AT5G42630.2     NVKDLTLAHVKSHLQMYRTVKCTDKGSPGE------GKVEKE------------------
pt037856_POPTR_ NVKDLTLAHVKSHLQMYRTVKSTDKG-SGQ------GQTDMG------------------
pt016715_POPTR_ NVKDLTLAHVKSHLQMYRTVKSTDRG-PGKLYCLSSGKADANNLPQPLNNPPPSPPPPPL
                *********************.**:* .*:      *:.:                    

AT5G42630.2     ----AEQRI---EDNNNNEEA---------DEGTDTNSPNSSSVQKTQRLLFIY------
pt037856_POPTR_ ----LNQRA-------------------------RI----------------------LE
pt016715_POPTR_ SSTQKNQRSLGDEKNISSLEALTYVNVEAHDHSKRLDSSSSSSSDMLLNLEFTLGRPSWQ
                     :**                                                    

AT5G42630.2     --------IFIFVKFCI
pt037856_POPTR_ VDAA-------------
pt016715_POPTR_ LDYAETTNELTLLK-C-
BoxShade v3.31 C (beta, 970507) Output
AT5G42630.2     M M M L E S R N - S M R A S N S V P D L S L Q I S L P N Y - H A G K P L H G G - - - - - - - - - D R S S T S S D S G S S
pt037856_POPTR_    - - - - - - - - - M M R A A S P F P Y L S L Q I S P P A V L E A K E T G D D G G L A R K A L C K D R S S A - T D S G S S
pt016715_POPTR_    - M F S S S K H I I M R S V S P F P D L S L Q I S P P S V - E A K E T G Y D G G L T R K A L C S D R S S T - T D S G S S
 
AT5G42630.2     L S D L S H E N N F F N K - - - - - - - - - - - P L L S L G F D - - - - - - - - - - - - - - - - - - H H H Q R R S N M F
pt037856_POPTR_    G S D L S H E N G L F N Q D R I A Y N L G P S Q P T L S L G F D M A D L S S P S F Q L P R N L N H L H H H - - - - - - -
pt016715_POPTR_    G S D L S H E N G F L N Q E R - S Y N L G P S E P T L S L G F D M A D L S S Q T L Q L P R N L N H - H H H - - - - - - -
 
AT5G42630.2     Q P Q I Y G R D F K R S S S S M V G L K R S I R A P R M R W T S T L H A H F V H A V Q L L G G H E R A T P K S V L E L M
pt037856_POPTR_    N P Q I Y G G D F K R S A R M I S G V R R S K R A P R M R W T T T L H A H F V H A V Q L L G G H E R A T P K S V L E L M
pt016715_POPTR_    Q P Q I Y G R D F K R S A R M I N G V K R S V R A P R M R W T T T L H A H F V H A V R L L G G H E R A T P K S V L E L M
 
AT5G42630.2     N V K D L T L A H V K S H L Q M Y R T V K C T D K G S P G E - - - - - - G K V E K E - - - - - - - - - - - - - - - - - -
pt037856_POPTR_    N V K D L T L A H V K S H L Q M Y R T V K S T D K G - S G Q - - - - - - G Q T D M G - - - - - - - - - - - - - - - - - -
pt016715_POPTR_    N V K D L T L A H V K S H L Q M Y R T V K S T D R G - P G K L Y C L S S G K A D A N N L P Q P L N N P P P S P P P P P L
 
AT5G42630.2     - - - - A E Q R I - - - E D N N N N E E A - - - - - - - - - D E G T D T N S P N S S S V Q K T Q R L L F I Y - - - - - -
pt037856_POPTR_    - - - - L N Q R A - - - - - - - - - - - - - - - - - - - - - - - - - R I - - - - - - - - - - - - - - - - - - - - - - L E
pt016715_POPTR_    S S T Q K N Q R S L G D E K N I S S L E A L T Y V N V E A H D H S K R L D S S S S S S S D M L L N L E F T L G R P S W Q
 
AT5G42630.2     - - - - - - - - I F I F V K F C I
pt037856_POPTR_    V D A A - - - - - - - - - - - - -
pt016715_POPTR_    L D Y A E T T N E L T L L K - C -
 
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