fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42630.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048045 not found in 331aa AT5G42630.1 1st_not 0.437823834 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42630.2     MMMLESRNSMR----ASNSVPDLSLQISLP---NYHAGKPLHG-------GDRSSTSSDS
gm048045_Glyma1 -MFTNSQTVMQTLLSSPSAEPDLSLNISPPSISDSEAAKDVVGSFGKVLYSDICST-SDS
                 *: :*:. *:    :..: *****:** *   : .*.* : *       .* .** ***

AT5G42630.2     GSS-LSDLSHENNFFN-------KPLLSLGFD------HHHQ---------RRSNMFQPQ
gm048045_Glyma1 GSSGGSDLSHE--FHNLGHHHHREPTLKLGFGTVDLNPHHHQVQGVPRSFNHHHHLLQPH
                ***  ******  *.*       :* *.***.      ****         :: :::**:

AT5G42630.2     IYGRDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVK
gm048045_Glyma1 IYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVK
                *********:  : *:***:********:*******************************

AT5G42630.2     DLTLAHVKSHLQMYRTVKCTDKG-------------------------------------
gm048045_Glyma1 DLTLAHVKSHLQMYRTVKSTDKGISTAGHGQTDIGLNPRLGINVHLHAPSPICDTPNLPD
                ******************.****                                     

AT5G42630.2     -------SPGEGKVEKEAEQ-RIED-------------NNNNEEADEGTDT-----NSPN
gm048045_Glyma1 PIQNSQRTPWQSSIETKTDNSRQEEPEIGLTYSHLKGNNNNNETMVDGHNNSGGLDSSPL
                       :* :..:*.:::: * *:             *****   :* :.     .** 

AT5G42630.2     SSSVQKTQRLLFIY--------------IFIFVKFCI
gm048045_Glyma1 SRSSEAMLDLEFTLGRPNWQKDHPESSRELTLLK-C-
                * * :    * *                 : ::* *
BoxShade v3.31 C (beta, 970507) Output
AT5G42630.2     M M M L E S R N S M R - - - - A S N S V P D L S L Q I S L P - - - N Y H A G K P L H G - - - - - - - G D R S S T S S D S
gm048045_Glyma1    - M F T N S Q T V M Q T L L S S P S A E P D L S L N I S P P S I S D S E A A K D V V G S F G K V L Y S D I C S T - S D S
 
AT5G42630.2     G S S - L S D L S H E N N F F N - - - - - - - K P L L S L G F D - - - - - - H H H Q - - - - - - - - - R R S N M F Q P Q
gm048045_Glyma1    G S S G G S D L S H E - - F H N L G H H H H R E P T L K L G F G T V D L N P H H H Q V Q G V P R S F N H H H H L L Q P H
 
AT5G42630.2     I Y G R D F K R S S S S M V G L K R S I R A P R M R W T S T L H A H F V H A V Q L L G G H E R A T P K S V L E L M N V K
gm048045_Glyma1    I Y G R D F K R S A R V V N G V K R S V R A P R M R W T T T L H A H F V H A V Q L L G G H E R A T P K S V L E L M N V K
 
AT5G42630.2     D L T L A H V K S H L Q M Y R T V K C T D K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm048045_Glyma1    D L T L A H V K S H L Q M Y R T V K S T D K G I S T A G H G Q T D I G L N P R L G I N V H L H A P S P I C D T P N L P D
 
AT5G42630.2     - - - - - - - S P G E G K V E K E A E Q - R I E D - - - - - - - - - - - - - N N N N E E A D E G T D T - - - - - N S P N
gm048045_Glyma1    P I Q N S Q R T P W Q S S I E T K T D N S R Q E E P E I G L T Y S H L K G N N N N N E T M V D G H N N S G G L D S S P L
 
AT5G42630.2     S S S V Q K T Q R L L F I Y - - - - - - - - - - - - - - I F I F V K F C I
gm048045_Glyma1    S R S S E A M L D L E F T L G R P N W Q K D H P E S S R E L T L L K - C -
 
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