fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023965 not found in 237aa AT3G19184.1 1st_not 0.444180522 II
Sb015351 not found in 230aa AT3G19184.1 1st_not 0.410926365 II
Gm008825 not found in 228aa AT5G42700.1 not_1st 0.520190023 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42700.1     ------MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQILN--STSVKISPMK--K--
Os023965_Os06t0 MIEAESQMAE-AASYEEQRRRQVEANKRKLEELRLHHLSAAVRE--SASKPSPVKQRKRK
gm008825_Glyma0 ------MVA--AIAYEESRRKRVEENRKRMEALNLPLLSQALHK-SPSPKSSPLK--QVK
Sb015351_Sorbi1 -------MAE-ATAYEEQRRRQVEANKRKLEELQLHHLSAAVREAAAAAKPSPVK--KRK
                       :.     *** * ::** *::::* *.*  **  :.   .: * **:*  :  

AT5G42700.1     -RSIPR---------------------TPEKKMVDVKRVHIQRRGVG----KKRDLLNRV
Os023965_Os06t0 ARALPGAGEDA---PLRRSGRVANLPEKPKYRDEFQDFEKRIRRSYGG---KRRDLSNRV
gm008825_Glyma0 NRTIQKE-----LVVVRRSSRVANLP-TPVYKEVVVDRVTIPRRTLGRPYNRHRDYANRV
Sb015351_Sorbi1 AR-VPLDAADAVMQPLRRSGRVANLPDKPAYREEVPAFARRIRRTYG-----RKDLANRV
                 * :                       .*  :          **  *     ::*  ***

AT5G42700.1     YVSEEIRDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGV
Os023965_Os06t0 YATDEQRDYAINAAQELEEELGSDYPIFVKPMLQSHVTGGFWLSLPTHFSRKYLPKRDET
gm008825_Glyma0 YASDEAREEALEKAETLMSGLESEHPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEV
Sb015351_Sorbi1 YATDEARSYTISKAEDLEQELDSRFPLFIKPMTQSHVTGGFWLGLPTGFCRKHLPKRDET
                *.::* *. ::. *: : . * * .* *:*.* ***::*****.**. *.:. *   * .

AT5G42700.1     ITLIDEEGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGS
Os023965_Os06t0 IRLVDEEDDEFDTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIRASS
gm008825_Glyma0 MTLIDEDGNEYPTIYLARKTGLSGGWKGFAVGHDLADGDAVIFQLIKHTAFKVYIIRANS
Sb015351_Sorbi1 ITLVDEDDVESNTLYLAMKKGLSGGWRGFAIQHKLVDGDCLVFQLIERTKFKVYIIRASS
                : *:**:. *  *:*** * ****** **:: *.*. ** ::*:*:.:* ***** *..*

AT5G42700.1     CGESSKDMS
Os023965_Os06t0 YYETDD---
gm008825_Glyma0 PPEDK----
Sb015351_Sorbi1 YYENED---
                  * .
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     - - - - - - M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N - - S T S V K I S P M K - - K - -
Os023965_Os06t0    M I E A E S Q M A E - A A S Y E E Q R R R Q V E A N K R K L E E L R L H H L S A A V R E - - S A S K P S P V K Q R K R K
gm008825_Glyma0    - - - - - - M V A - - A I A Y E E S R R K R V E E N R K R M E A L N L P L L S Q A L H K - S P S P K S S P L K - - Q V K
Sb015351_Sorbi1    - - - - - - - M A E - A T A Y E E Q R R R Q V E A N K R K L E E L Q L H H L S A A V R E A A A A A K P S P V K - - K R K
 
AT5G42700.1     - R S I P R - - - - - - - - - - - - - - - - - - - - - T P E K K M V D V K R V H I Q R R G V G - - - - K K R D L L N R V
Os023965_Os06t0    A R A L P G A G E D A - - - P L R R S G R V A N L P E K P K Y R D E F Q D F E K R I R R S Y G G - - - K R R D L S N R V
gm008825_Glyma0    N R T I Q K E - - - - - L V V V R R S S R V A N L P - T P V Y K E V V V D R V T I P R R T L G R P Y N R H R D Y A N R V
Sb015351_Sorbi1    A R - V P L D A A D A V M Q P L R R S G R V A N L P D K P A Y R E E V P A F A R R I R R T Y G - - - - - R K D L A N R V
 
AT5G42700.1     Y V S E E I R D E A I S R A N K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V
Os023965_Os06t0    Y A T D E Q R D Y A I N A A Q E L E E E L G S D Y P I F V K P M L Q S H V T G G F W L S L P T H F S R K Y L P K R D E T
gm008825_Glyma0    Y A S D E A R E E A L E K A E T L M S G L E S E H P A F I K S M L Q S H I S G G F W L G L P V H F C K S N L P K G D E V
Sb015351_Sorbi1    Y A T D E A R S Y T I S K A E D L E Q E L D S R F P L F I K P M T Q S H V T G G F W L G L P T G F C R K H L P K R D E T
 
AT5G42700.1     I T L I D E E G E E Y E T I Y L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S
Os023965_Os06t0    I R L V D E E D D E F D T L Y L A N K R G L S G G W R G F S I A H K L V D G D C L V F Q L I Q R T K F K V Y I I R A S S
gm008825_Glyma0    M T L I D E D G N E Y P T I Y L A R K T G L S G G W K G F A V G H D L A D G D A V I F Q L I K H T A F K V Y I I R A N S
Sb015351_Sorbi1    I T L V D E D D V E S N T L Y L A M K K G L S G G W R G F A I Q H K L V D G D C L V F Q L I E R T K F K V Y I I R A S S
 
AT5G42700.1     C G E S S K D M S
Os023965_Os06t0    Y Y E T D D - - -
gm008825_Glyma0    P P E D K - - - -
Sb015351_Sorbi1    Y Y E N E D - - -
 
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