fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014014 not found in 232aa AT5G42700.1 1st_1st 0.522565320 Ia
Pt016309 not found in 205aa AT5G42700.1 1st_1st 0.524940617 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQILNSTSV--KISPMKKRSIPRTPEKK
gm014014_Glyma0 -MVAAI-AYEESRRKRVEENKKRMEALNLPLLSQALQKSSPSPKSSPL-KQVKHRAIQKE
pt016309_POPTR_ -MVAKISAYEESRRKRMEENKKRMEALNLHKLSRALKISTPT-KSSPM-KRSKPRVVEKQ
                 :*     *** * **:************  **: *: ::   * **: *:   *. :*:

AT5G42700.1     MVDVK-------------------RVHIQRRGVG----KKRDLLNRVYVSEEIRDEAISR
gm014014_Glyma0 VVVVRRSSRVANLPSPVYKEIVIDRVTMPRRSLCRSYDKYRDYANRVYASDEAREEALEK
pt016309_POPTR_ VVVVRRSSRC---------DTVLLRIS-----------KARDLSNRVYATDEARAKAMEK
                :* *:                   *:            * **  ****.::* * :*:.:

AT5G42700.1     ANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYET
gm014014_Glyma0 AEKLMSGLESEYPAFIKSMLQSHVSGGFWLGLPVHFCKSNLPKKDEVVTLIDEDGTEYST
pt016309_POPTR_ AEKLQSDLGSDYPIFIKSMLQSHVTGGFWLGLPVDFCRRNLPRRDDVITLIDEEADEYQV
                *:*: . * * ** *:********:*********.**: :*  :* *:*****:. **..

AT5G42700.1     IYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESSKDMS
gm014014_Glyma0 IYLAGKTGLSGGWRGFAIAHDLADGDALIFQLIKRTTFKVYIVR-AICPPDDKQLE
pt016309_POPTR_ IYLARKNGLSGGWKGFAVAHGLLDGDAVVFQLIKPTACKVVVNM-HQCY-------
                **** *.****** ***:**.*  **:::*:*:: *: ** :     *
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N S T S V - - K I S P M K K R S I P R T P E K K
gm014014_Glyma0    - M V A A I - A Y E E S R R K R V E E N K K R M E A L N L P L L S Q A L Q K S S P S P K S S P L - K Q V K H R A I Q K E
pt016309_POPTR_    - M V A K I S A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T - K S S P M - K R S K P R V V E K Q
 
AT5G42700.1     M V D V K - - - - - - - - - - - - - - - - - - - R V H I Q R R G V G - - - - K K R D L L N R V Y V S E E I R D E A I S R
gm014014_Glyma0    V V V V R R S S R V A N L P S P V Y K E I V I D R V T M P R R S L C R S Y D K Y R D Y A N R V Y A S D E A R E E A L E K
pt016309_POPTR_    V V V V R R S S R C - - - - - - - - - D T V L L R I S - - - - - - - - - - - K A R D L S N R V Y A T D E A R A K A M E K
 
AT5G42700.1     A N K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E E G E E Y E T
gm014014_Glyma0    A E K L M S G L E S E Y P A F I K S M L Q S H V S G G F W L G L P V H F C K S N L P K K D E V V T L I D E D G T E Y S T
pt016309_POPTR_    A E K L Q S D L G S D Y P I F I K S M L Q S H V T G G F W L G L P V D F C R R N L P R R D D V I T L I D E E A D E Y Q V
 
AT5G42700.1     I Y L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C G E S S K D M S
gm014014_Glyma0    I Y L A G K T G L S G G W R G F A I A H D L A D G D A L I F Q L I K R T T F K V Y I V R - A I C P P D D K Q L E
pt016309_POPTR_    I Y L A R K N G L S G G W K G F A V A H G L L D G D A V V F Q L I K P T A C K V V V N M - H Q C Y - - - - - - -
 
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