fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp034825 not found in 391aa AT5G42700.1 1st_1st 0.346793349 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42700.1     --MVVEKQ-TKYEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIPR---T
pp034825_Pp1s43 MAVVVSGQLVPYEETRKRRVEENKRRMEELGLFDFS----NSFVKNQPMRRKSVRRKTLS
                  :**. * . *** * :******:*** *.* .:*    .: ** .**:::*: *   :

AT5G42700.1     PEKKMVDVKR----------------VHIQRRGVGKK----------RDLLNRVYVSEEI
pp034825_Pp1s43 PEEVATEARRSPRFAGKPVVEHEDVEIHKQRRGLSRSGLHARCGTVYRQLAGRRDVPEST
                **:  .:.:*                :* ****:.:.          *:* .*  *.*. 

AT5G42700.1     RDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDE
pp034825_Pp1s43 RQAALDAAEVVYKALKN--PGFVRGMLHSHTASGFWLGLPVSFCREYLPHRDETIVLEDE
                *: *:. *: . . * .  *.**:.**:**.:.********.**:.:*  :* .*.* **

AT5G42700.1     EGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITR---------
pp034825_Pp1s43 KLLEWECVYLAKKIGLSGGWRGFSIDHSLVDGDACVFELVEPKRFKIHIFRCDNCEGSEV
                :  *:* :***:* ****** **:: *.*. **: *****. . **::* *         

AT5G42700.1     ------------------------------------------------------------
pp034825_Pp1s43 EDGSVGGNVSDSDALPKNKVSEDGDNNSPVAATSSEPRPRKLDEEYGEETDASTEACKSL
                                                                            

AT5G42700.1     -----------------------------------------------------VGSCGES
pp034825_Pp1s43 KREAGADVAHSLRSSKHRRVKEENNDSTYSIATRSTRSKRKNDDNANGIVVEIVGACADE
                                                                     **:*.:.

AT5G42700.1     S--KDMS------------------------------
pp034825_Pp1s43 DYVKDARKPAAQNKTHQTEILSFGRITRNSTARSLKK
                .  **
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     - - M V V E K Q - T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N S T S V K I S P M K K R S I P R - - - T
pp034825_Pp1s43    M A V V V S G Q L V P Y E E T R K R R V E E N K R R M E E L G L F D F S - - - - N S F V K N Q P M R R K S V R R K T L S
 
AT5G42700.1     P E K K M V D V K R - - - - - - - - - - - - - - - - V H I Q R R G V G K K - - - - - - - - - - R D L L N R V Y V S E E I
pp034825_Pp1s43    P E E V A T E A R R S P R F A G K P V V E H E D V E I H K Q R R G L S R S G L H A R C G T V Y R Q L A G R R D V P E S T
 
AT5G42700.1     R D E A I S R A N K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E
pp034825_Pp1s43    R Q A A L D A A E V V Y K A L K N - - P G F V R G M L H S H T A S G F W L G L P V S F C R E Y L P H R D E T I V L E D E
 
AT5G42700.1     E G E E Y E T I Y L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R - - - - - - - - -
pp034825_Pp1s43    K L L E W E C V Y L A K K I G L S G G W R G F S I D H S L V D G D A C V F E L V E P K R F K I H I F R C D N C E G S E V
 
AT5G42700.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp034825_Pp1s43    E D G S V G G N V S D S D A L P K N K V S E D G D N N S P V A A T S S E P R P R K L D E E Y G E E T D A S T E A C K S L
 
AT5G42700.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V G S C G E S
pp034825_Pp1s43    K R E A G A D V A H S L R S S K H R R V K E E N N D S T Y S I A T R S T R S K R K N D D N A N G I V V E I V G A C A D E
 
AT5G42700.1     S - - K D M S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp034825_Pp1s43    D Y V K D A R K P A A Q N K T H Q T E I L S F G R I T R N S T A R S L K K
 
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