fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016309 not found in 205aa AT5G42700.1 1st_1st 0.524940617 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQILN-STSVKISPMKKRSIPRTPEKKM
pt016309_POPTR_ -MVAKISAYEESRRKRMEENKKRMEALNLHKLSRALKISTPTKSSPM-KRSKPRVVEKQV
                 :* * : *** * **:************ ***: *: **..* *** *** **. **::

AT5G42700.1     VDVKR------VHIQRRGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSFVKS
pt016309_POPTR_ VVVRRSSRCDTVLLR---ISKARDLSNRVYATDEARAKAMEKAEKLQSDLGSDYPIFIKS
                * *:*      * ::   :.* *** ****.::* * :*:.:*:*:*.:***.** *:**

AT5G42700.1     MLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAV
pt016309_POPTR_ MLQSHVTGGFWLGLPVDFCRRNLPRRDDVITLIDEEADEYQVIYLARKNGLSGGWKGFAV
                ******:*********:**: :*  :*.********.:**:.************* ****

AT5G42700.1     AHNLAYGDTLVFELVRRTAFKVYITRVGSCGESSKDMS
pt016309_POPTR_ AHGLLDGDAVVFQLIKPTACKV-VVNMHQCY-------
                **.*  **::**:*:: ** ** :..: .*
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N - S T S V K I S P M K K R S I P R T P E K K M
pt016309_POPTR_    - M V A K I S A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T K S S P M - K R S K P R V V E K Q V
 
AT5G42700.1     V D V K R - - - - - - V H I Q R R G V G K K R D L L N R V Y V S E E I R D E A I S R A N K F Q D E L G S G Y P S F V K S
pt016309_POPTR_    V V V R R S S R C D T V L L R - - - I S K A R D L S N R V Y A T D E A R A K A M E K A E K L Q S D L G S D Y P I F I K S
 
AT5G42700.1     M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E E G E E Y E T I Y L A R K N G L S G G W M G F A V
pt016309_POPTR_    M L Q S H V T G G F W L G L P V D F C R R N L P R R D D V I T L I D E E A D E Y Q V I Y L A R K N G L S G G W K G F A V
 
AT5G42700.1     A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C G E S S K D M S
pt016309_POPTR_    A H G L L D G D A V V F Q L I K P T A C K V - V V N M H Q C Y - - - - - - -
 
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