fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016309 not found in 205aa AT5G42700.1 1st_1st 0.524940617 Ia
Pt021340 not found in 270aa AT3G19184.1 not_not 0.489311163 III
Pt016896 not found in 227aa AT3G19184.1 not_not 0.486935866 III
Pt021285 not found in 260aa AT3G19184.1 not_not 0.446555819 III
Pt021284 not found in 278aa AT3G19184.1 not_not 0.446555819 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQIL-NSTSVKISPMKKRSIPRTPEKKM
pt021285_POPTR_ -MAKSKQTYEEIRQKRVEENKKRMEELNLTKLSQSL-LSKP---SPL-KKGKPRTFRPAA
pt021340_POPTR_ -MMKSKQTYEETRQKRMEENKKRMEELNLTKLSQSL-LSKP---SPV-KKAKPRISRSPV
pt016896_POPTR_ -MAAKVTAYEESRRKRMEENKKRMEALNLHKLSRALKISTPTKSSPL-KRSKPRVVEKQV
pt016309_POPTR_ -MVAKISAYEESRRKRMEENKKRMEALNLHKLSRALKISTPTKSSPM-KRSKPRVVEKQV
pt021284_POPTR_ -MAKSKQTYEEIRQKRVEENKKRMEELNLTKLSQSL-LSKP---SPL-KKGKPRTFRPAA
                 :  .   *** * **:******** *** ***: *  *..   **: *:. **  .   

AT5G42700.1     VD--VKR-------------------VHIQRRGVGKKRDLLNRVYVSEEIRDEAISRANK
pt021285_POPTR_ ALTPVRRSTRVSDRPTVSYKELPVETLERTRR-SYSYRRRGFGVYASSEARAYAIDKAEQ
pt021340_POPTR_ ASTPVRRSNRVADKPPVSYKEVPIEPLARPRR-SYQRRDLLNRVYASDEVRIYAIHRADQ
pt016896_POPTR_ VV--VRRSNRIANKPAPFFKEAVIDRVVIPRR-ISKAADLSNLVFATDEARAKAIEKAEK
pt016309_POPTR_ VV--VRRSSR-------------CDTVLL--R-ISKARDLSNRVYATDEARAKAMEKAEK
pt021284_POPTR_ ALTPVRRSTRVSDRPTVSYKELPVETLERTRR-SYSYRRRGFGVYASSEARAYAIDKAEQ
                .   *:*                   :    *   .       *:.:.* *  *: :*::

AT5G42700.1     FQDELGSGYPSFVKSMLQSHVSGGFWLG-LPVQFCKSHLGLHDGVITLIDEEGEEYETIY
pt021285_POPTR_ IQSRLGADFPSFLKPMVQSHVSGCFWLG-LPVYFCKSHLPLSDEMMTLEDENGDEFQTKY
pt021340_POPTR_ IQSSLGADFPSFVKPMLQSHVTGGFWLG-LPVPFCKAHLPHYDEMITLEDENGDESETKY
pt016896_POPTR_ LQSDLGSDYPTFIKSMLQSHVTGGFWLGCLPLDFCRRNLPRRGDFITLIDEDADEYQVTY
pt016309_POPTR_ LQSDLGSDYPIFIKSMLQSHVTGGFWLG-LPVDFCRRNLPRRDDVITLIDEEADEYQVIY
pt021284_POPTR_ IQSRLGADFPSFLKPMVQSHVSGCFWLG-LPVYFCKSHLPLSDEMMTLEDENGDEFQTKY
                :*. **:.:* *:*.*:****:* **** **: **: :*   . .:** **:.:* :. *

AT5G42700.1     LARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSC--GESSKDMS----
pt021285_POPTR_ LAQKTGLSGGWRGFSIDHELVDGDALVFQLVSPTRFKVYIARAYDSEDNENKEDMEED--
pt021340_POPTR_ LAGKTGLSGGWRGFAIDHDLVDGDALVFQLVSPTKFKVYIVRAYDSEDNEDQENTKDDEV
pt016896_POPTR_ LARQNGLSGGWKGFAVAHGLLDGDAVVFQLIKPTTCKVYIIRVNGSEQGNSL--------
pt016309_POPTR_ LARKNGLSGGWKGFAVAHGLLDGDAVVFQLIKPTACKV-VVNMHQCY-------------
pt021284_POPTR_ LAQKTGLSGGWRGFSIDHELVDGDALVFQLVSPTRFKVYIARAYDSEDNENKEDMEED--
                ** :.****** **:: * *  **::**:*:  *  ** : .   .              

AT5G42700.1     ---------------------------------------------------------
pt021285_POPTR_ --------NEGKENIDNDKNSDSKHLD-GIAKRTRASRK------------------
pt021340_POPTR_ KDNTEDKEDEGKSE-ENGKVSDATDLNRRYSKRIRASKK------------------
pt016896_POPTR_ ---------------------------------------------------------
pt016309_POPTR_ ---------------------------------------------------------
pt021284_POPTR_ --------NEGKENIDNDKNSDSKHLD-GIAKRTRASNCFSTLQNLQKFSMIGNQST
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L - N S T S V K I S P M K K R S I P R T P E K K M
pt021285_POPTR_    - M A K S K Q T Y E E I R Q K R V E E N K K R M E E L N L T K L S Q S L - L S K P - - - S P L - K K G K P R T F R P A A
pt021340_POPTR_    - M M K S K Q T Y E E T R Q K R M E E N K K R M E E L N L T K L S Q S L - L S K P - - - S P V - K K A K P R I S R S P V
pt016896_POPTR_    - M A A K V T A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T K S S P L - K R S K P R V V E K Q V
pt016309_POPTR_    - M V A K I S A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T K S S P M - K R S K P R V V E K Q V
pt021284_POPTR_    - M A K S K Q T Y E E I R Q K R V E E N K K R M E E L N L T K L S Q S L - L S K P - - - S P L - K K G K P R T F R P A A
 
AT5G42700.1     V D - - V K R - - - - - - - - - - - - - - - - - - - V H I Q R R G V G K K R D L L N R V Y V S E E I R D E A I S R A N K
pt021285_POPTR_    A L T P V R R S T R V S D R P T V S Y K E L P V E T L E R T R R - S Y S Y R R R G F G V Y A S S E A R A Y A I D K A E Q
pt021340_POPTR_    A S T P V R R S N R V A D K P P V S Y K E V P I E P L A R P R R - S Y Q R R D L L N R V Y A S D E V R I Y A I H R A D Q
pt016896_POPTR_    V V - - V R R S N R I A N K P A P F F K E A V I D R V V I P R R - I S K A A D L S N L V F A T D E A R A K A I E K A E K
pt016309_POPTR_    V V - - V R R S S R - - - - - - - - - - - - - C D T V L L - - R - I S K A R D L S N R V Y A T D E A R A K A M E K A E K
pt021284_POPTR_    A L T P V R R S T R V S D R P T V S Y K E L P V E T L E R T R R - S Y S Y R R R G F G V Y A S S E A R A Y A I D K A E Q
 
AT5G42700.1     F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G - L P V Q F C K S H L G L H D G V I T L I D E E G E E Y E T I Y
pt021285_POPTR_    I Q S R L G A D F P S F L K P M V Q S H V S G C F W L G - L P V Y F C K S H L P L S D E M M T L E D E N G D E F Q T K Y
pt021340_POPTR_    I Q S S L G A D F P S F V K P M L Q S H V T G G F W L G - L P V P F C K A H L P H Y D E M I T L E D E N G D E S E T K Y
pt016896_POPTR_    L Q S D L G S D Y P T F I K S M L Q S H V T G G F W L G C L P L D F C R R N L P R R G D F I T L I D E D A D E Y Q V T Y
pt016309_POPTR_    L Q S D L G S D Y P I F I K S M L Q S H V T G G F W L G - L P V D F C R R N L P R R D D V I T L I D E E A D E Y Q V I Y
pt021284_POPTR_    I Q S R L G A D F P S F L K P M V Q S H V S G C F W L G - L P V Y F C K S H L P L S D E M M T L E D E N G D E F Q T K Y
 
AT5G42700.1     L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C - - G E S S K D M S - - - -
pt021285_POPTR_    L A Q K T G L S G G W R G F S I D H E L V D G D A L V F Q L V S P T R F K V Y I A R A Y D S E D N E N K E D M E E D - -
pt021340_POPTR_    L A G K T G L S G G W R G F A I D H D L V D G D A L V F Q L V S P T K F K V Y I V R A Y D S E D N E D Q E N T K D D E V
pt016896_POPTR_    L A R Q N G L S G G W K G F A V A H G L L D G D A V V F Q L I K P T T C K V Y I I R V N G S E Q G N S L - - - - - - - -
pt016309_POPTR_    L A R K N G L S G G W K G F A V A H G L L D G D A V V F Q L I K P T A C K V - V V N M H Q C Y - - - - - - - - - - - - -
pt021284_POPTR_    L A Q K T G L S G G W R G F S I D H E L V D G D A L V F Q L V S P T R F K V Y I A R A Y D S E D N E N K E D M E E D - -
 
AT5G42700.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021285_POPTR_    - - - - - - - - N E G K E N I D N D K N S D S K H L D - G I A K R T R A S R K - - - - - - - - - - - - - - - - - -
pt021340_POPTR_    K D N T E D K E D E G K S E - E N G K V S D A T D L N R R Y S K R I R A S K K - - - - - - - - - - - - - - - - - -
pt016896_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt016309_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021284_POPTR_    - - - - - - - - N E G K E N I D N D K N S D S K H L D - G I A K R T R A S N C F S T L Q N L Q K F S M I G N Q S T
 
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