fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015351 not found in 230aa AT3G19184.1 1st_not 0.410926365 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQILN--STSVKISPMKKR---------
Sb015351_Sorbi1 --MAEATAYEEQRRRQVEANKRKLEELQLHHLSAAVREAAAAAKPSPVKKRKARVPLDAA
                  : : * *** * ::** **:::* *:* :**  :.  :::.* **:***         

AT5G42700.1     --------------SIPRTP---EKKMVDVKRVHIQRRGVGKKRDLLNRVYVSEEIRDEA
Sb015351_Sorbi1 DAVMQPLRRSGRVANLPDKPAYREEVPAFARRI---RRTYGRK-DLANRVYATDEARSYT
                              .:* .*   *:  . .:*:   **  *:* ** ****.::* *. :

AT5G42700.1     ISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEE
Sb015351_Sorbi1 ISKAEDLEQELDSRFPLFIKPMTQSHVTGGFWLGLPTGFCRKHLPKRDETITLVDEDDVE
                **:*:.:::**.* :* *:*.* ****:********. **:.**  :* .***:**:. *

AT5G42700.1     YETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESSKDMS
Sb015351_Sorbi1 SNTLYLAMKKGLSGGWRGFAIQHKLVDGDCLVFQLIERTKFKVYIIRASSYYENED---
                 :*:*** *:****** ***: *:*. ** ***:*:.** ***** *..*  *...
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N - - S T S V K I S P M K K R - - - - - - - - -
Sb015351_Sorbi1    - - M A E A T A Y E E Q R R R Q V E A N K R K L E E L Q L H H L S A A V R E A A A A A K P S P V K K R K A R V P L D A A
 
AT5G42700.1     - - - - - - - - - - - - - - S I P R T P - - - E K K M V D V K R V H I Q R R G V G K K R D L L N R V Y V S E E I R D E A
Sb015351_Sorbi1    D A V M Q P L R R S G R V A N L P D K P A Y R E E V P A F A R R I - - - R R T Y G R K - D L A N R V Y A T D E A R S Y T
 
AT5G42700.1     I S R A N K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E E G E E
Sb015351_Sorbi1    I S K A E D L E Q E L D S R F P L F I K P M T Q S H V T G G F W L G L P T G F C R K H L P K R D E T I T L V D E D D V E
 
AT5G42700.1     Y E T I Y L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C G E S S K D M S
Sb015351_Sorbi1    S N T L Y L A M K K G L S G G W R G F A I Q H K L V D G D C L V F Q L I E R T K F K V Y I I R A S S Y Y E N E D - - -
 
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