fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008825 not found in 228aa AT5G42700.1 not_1st 0.520190023 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQILN-STSVKISPMKK---RSIPR---
gm008825_Glyma0 MVA--AIAYEESRRKRVEENRKRMEALNLPLLSQALHKSPSPKSSPLKQVKNRTIQKELV
                **.     *** * ******:********* *** *: *.* * **:*:   *:* :   

AT5G42700.1     ------------TPEKKMVDVKRVHIQRRGVG----KKRDLLNRVYVSEEIRDEAISRAN
gm008825_Glyma0 VVRRSSRVANLPTPVYKEVVVDRVTIPRRTLGRPYNRHRDYANRVYASDEAREEALEKAE
                            **  * * *.** * ** :*    ::**  ****.*:* *:**:.:*:

AT5G42700.1     KFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIY
gm008825_Glyma0 TLMSGLESEHPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIY
                .: . * * :*:*:*******:**********:****:*   * *:*****:*:** ***

AT5G42700.1     LARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESSKDMS
gm008825_Glyma0 LARKTGLSGGWKGFAVGHDLADGDAVIFQLIKHTAFKVYIIRANSPPEDK----
                ****.****** ****.*:** **:::*:*:::******* *..*  *..
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L N - S T S V K I S P M K K - - - R S I P R - - -
gm008825_Glyma0    M V A - - A I A Y E E S R R K R V E E N R K R M E A L N L P L L S Q A L H K S P S P K S S P L K Q V K N R T I Q K E L V
 
AT5G42700.1     - - - - - - - - - - - - T P E K K M V D V K R V H I Q R R G V G - - - - K K R D L L N R V Y V S E E I R D E A I S R A N
gm008825_Glyma0    V V R R S S R V A N L P T P V Y K E V V V D R V T I P R R T L G R P Y N R H R D Y A N R V Y A S D E A R E E A L E K A E
 
AT5G42700.1     K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E E G E E Y E T I Y
gm008825_Glyma0    T L M S G L E S E H P A F I K S M L Q S H I S G G F W L G L P V H F C K S N L P K G D E V M T L I D E D G N E Y P T I Y
 
AT5G42700.1     L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C G E S S K D M S
gm008825_Glyma0    L A R K T G L S G G W K G F A V G H D L A D G D A V I F Q L I K H T A F K V Y I I R A N S P P E D K - - - -
 
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