fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014014 not found in 232aa AT5G42700.1 1st_1st 0.522565320 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42700.1     MVVEKQTKYEEFRLKRVEENKKRMEALNLPKLSQIL--NSTSVKISPMKK---RSIPR--
gm014014_Glyma0 MVA--AIAYEESRRKRVEENKKRMEALNLPLLSQALQKSSPSPKSSPLKQVKHRAIQKEV
                **.     *** * **************** *** *  .*.* * **:*:   *:* :  

AT5G42700.1     -------------TPEKKMVDVKRVHIQRRGV----GKKRDLLNRVYVSEEIRDEAISRA
gm014014_Glyma0 VVVRRSSRVANLPSPVYKEIVIDRVTMPRRSLCRSYDKYRDYANRVYASDEAREEALEKA
                             :*  * : :.** : **.:    .* **  ****.*:* *:**:.:*

AT5G42700.1     NKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETI
gm014014_Glyma0 EKLMSGLESEYPAFIKSMLQSHVSGGFWLGLPVHFCKSNLPKKDEVVTLIDEDGTEYSTI
                :*: . * * **:*:******************:****:*  :* *:*****:* **.**

AT5G42700.1     YLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESSKDMS
gm014014_Glyma0 YLAGKTGLSGGWRGFAIAHDLADGDALIFQLIKRTTFKVYIVR-AICPPDDKQLE
                *** *.****** ***:**:** **:*:*:*::**:*****.* . *  ..*::.
BoxShade v3.31 C (beta, 970507) Output
AT5G42700.1     M V V E K Q T K Y E E F R L K R V E E N K K R M E A L N L P K L S Q I L - - N S T S V K I S P M K K - - - R S I P R - -
gm014014_Glyma0    M V A - - A I A Y E E S R R K R V E E N K K R M E A L N L P L L S Q A L Q K S S P S P K S S P L K Q V K H R A I Q K E V
 
AT5G42700.1     - - - - - - - - - - - - - T P E K K M V D V K R V H I Q R R G V - - - - G K K R D L L N R V Y V S E E I R D E A I S R A
gm014014_Glyma0    V V V R R S S R V A N L P S P V Y K E I V I D R V T M P R R S L C R S Y D K Y R D Y A N R V Y A S D E A R E E A L E K A
 
AT5G42700.1     N K F Q D E L G S G Y P S F V K S M L Q S H V S G G F W L G L P V Q F C K S H L G L H D G V I T L I D E E G E E Y E T I
gm014014_Glyma0    E K L M S G L E S E Y P A F I K S M L Q S H V S G G F W L G L P V H F C K S N L P K K D E V V T L I D E D G T E Y S T I
 
AT5G42700.1     Y L A R K N G L S G G W M G F A V A H N L A Y G D T L V F E L V R R T A F K V Y I T R V G S C G E S S K D M S
gm014014_Glyma0    Y L A G K T G L S G G W R G F A I A H D L A D G D A L I F Q L I K R T T F K V Y I V R - A I C P P D D K Q L E
 
0