fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034010 not found in 315aa AT5G42820.1 1st_1st 0.804195804 Ia
Pt038987 not found in 273aa AT5G42820.1 1st_1st 0.832167832 Ia
Pp018447 not found in 327aa AT5G42820.1 1st_1st 0.722610722 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-IT
pp018447_Pp1s21 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFH
gm034010_Glyma1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDM-IT
pt038987_POPTR_ MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-IT
                *************************.***********.:*: * *:**:**** **  : 

AT5G42820.1     PGVDPQG--QPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFK
pp018447_Pp1s21 GGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFR
gm034010_Glyma1 PGVDAHG--HPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFR
pt038987_POPTR_ PGVDAQG--QPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFK
                 *** :*  :  ** *:*:***:****:*:**.*:*::*.***********:***** *:

AT5G42820.1     EEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIS
pp018447_Pp1s21 EEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS
gm034010_Glyma1 EEEHAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS
pt038987_POPTR_ EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG
                **::** *:. * ****:***** ***************:***.***********:* *.

AT5G42820.1     RELRRKLFGRYRRSYRRGSRSRSRSISPRRKR---EHSRERERGDVRDRDR---------
pp018447_Pp1s21 RELRRKLFGNYRR------RSRSRSHSPYGRG---EARGPPSPRRYGDRDFY-DSRRGGG
gm034010_Glyma1 RELRRQLFG---KSHGRHSRSRSR--SPYRHRSHEERSHRSHSRKYDDRDHHHESRSRRH
pt038987_POPTR_ RDLRRKLFGRY-RGYRV-SRSRSRSVSP-RKR---ERDYDRRERDYRDRDRD---RDRDY
                *:***:***   :      *****  **  :    *           ***          

AT5G42820.1     HGNGKRSSDRSERHD--------------RDGGGRRRHGSPKRSRSP------RNVREGS
pp018447_Pp1s21 RGGGGRGRSYGRRYEEWDDRRYDDRRGGGRSDGGRRRDRS--RSRTPPRRGRSPGAREGS
gm034010_Glyma1 RSTSPRHR-RGRSRS--------------RSPGGRRHHSP---------------VRDGS
pt038987_POPTR_ RGNGR----RNDKYD--------------RE-GGRKRHGS--------------TVREGS
                :. .      .   .              *. ***::. .               .*:**

AT5G42820.1     EERRARIEQWNRERDEGV-----------------------------------
pp018447_Pp1s21 AERRAKIEQWNREREVRQ-----AAETAPAGSPHRRDSAAYDNE---------
gm034010_Glyma1 EERRARIEQWNREREDQEPGYKVNAEEINNGNASKHHGHQQQEQEPQSPQEGQ
pt038987_POPTR_ EERRARIEQWNREREEKQ-----------------------------------
                 ****:********:
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M - I T
pp018447_Pp1s21    M A E H L A S I F G T E K D R V N C P F Y F K I G V C R H G D R C S R L H N R P T A S Q T L L L A N M Y Q S P D A G F H
gm034010_Glyma1    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P S I S P T I L L S N M Y Q R P D M - I T
pt038987_POPTR_    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M - I T
 
AT5G42820.1     P G V D P Q G - - Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K
pp018447_Pp1s21    G G V D Q H G N I Q Q S D P R K L Q E H F E D F Y E D I F E E L S K Y G E I E N L N V C D N L A D H M I G N V Y V K F R
gm034010_Glyma1    P G V D A H G - - H P I D P R K I Q D H F E E F Y E D L F D E L S K Y G D I E S L N V C D N L A D H M V G N V Y V Q F R
pt038987_POPTR_    P G V D A Q G - - Q P L D P H K I Q E H F E E F Y E D I F E E L N K F G E I E S L N V C D N L A D H M I G N V Y V L F K
 
AT5G42820.1     E E D H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S
pp018447_Pp1s21    E E E H A A A A L N A L S G R F Y A G R P I I L D F S P V T D F R E A T C R Q Y E E N T C N R G G Y C N F M H L K K I S
gm034010_Glyma1    E E E H A A N A V R N L T G R F Y A G R P I I V D F S P V T D F R E A T C R Q Y E E N T C N R G G Y C N F M H L K R I S
pt038987_POPTR_    E E D Q A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q F E E N N C N R G G Y C N F M H V K L I G
 
AT5G42820.1     R E L R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R - - - E H S R E R E R G D V R D R D R - - - - - - - - -
pp018447_Pp1s21    R E L R R K L F G N Y R R - - - - - - R S R S R S H S P Y G R G - - - E A R G P P S P R R Y G D R D F Y - D S R R G G G
gm034010_Glyma1    R E L R R Q L F G - - - K S H G R H S R S R S R - - S P Y R H R S H E E R S H R S H S R K Y D D R D H H H E S R S R R H
pt038987_POPTR_    R D L R R K L F G R Y - R G Y R V - S R S R S R S V S P - R K R - - - E R D Y D R R E R D Y R D R D R D - - - R D R D Y
 
AT5G42820.1     H G N G K R S S D R S E R H D - - - - - - - - - - - - - - R D G G G R R R H G S P K R S R S P - - - - - - R N V R E G S
pp018447_Pp1s21    R G G G G R G R S Y G R R Y E E W D D R R Y D D R R G G G R S D G G R R R D R S - - R S R T P P R R G R S P G A R E G S
gm034010_Glyma1    R S T S P R H R - R G R S R S - - - - - - - - - - - - - - R S P G G R R H H S P - - - - - - - - - - - - - - - V R D G S
pt038987_POPTR_    R G N G R - - - - R N D K Y D - - - - - - - - - - - - - - R E - G G R K R H G S - - - - - - - - - - - - - - T V R E G S
 
AT5G42820.1     E E R R A R I E Q W N R E R D E G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp018447_Pp1s21    A E R R A K I E Q W N R E R E V R Q - - - - - A A E T A P A G S P H R R D S A A Y D N E - - - - - - - - -
gm034010_Glyma1    E E R R A R I E Q W N R E R E D Q E P G Y K V N A E E I N N G N A S K H H G H Q Q Q E Q E P Q S P Q E G Q
pt038987_POPTR_    E E R R A R I E Q W N R E R E E K Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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