fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019921 not found in 320aa AT1G27650.1 not_not 0.766899766 III
Pt022215 not found in 183aa AT1G27650.1 not_not 0.503496503 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
pt022215_POPTR_ MAEHLASIFGTEKDRVNCPFYFKIRACR--------HTKPSISRTLLLSNMYRRPDMITP
pt019921_POPTR_ MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
                ************************ ***        *.:*::* ********:*******

AT5G42820.1     GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED
pt022215_POPTR_ GVDALGNTIDPRKIQQYF-----------------ESLNVCDNLAEHMVGNVYVRFREQE
pt019921_POPTR_ GVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEE
                ***. *:.:** :**::*                 **********:**:***** *:*::

AT5G42820.1     HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL
pt022215_POPTR_ RASNALKDLTGRFFPGRLIIVGFSPVTDFCEATCKQYEENVCNRGGYC------------
pt019921_POPTR_ HASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGREL
                :*: **: * ***:.** **..******* ****:***** *******            

AT5G42820.1     RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSD------
pt022215_POPTR_ ------------------------------------------------------------
pt019921_POPTR_ RRQLFGSYRR-----RRSHSRSRSPYRHRSHEEHSHSG-------RGSGRRYDDREHYYE
                                                                            

AT5G42820.1     -RSERHDRDGGGRR--RHGSP-------KRSRSPRNVREGSEERRARIEQWNRERD--EG
pt022215_POPTR_ -KKKKWQCSRGGRG--CSKSPGHWRGQGRRKRSP--VRERSEETC---------------
pt019921_POPTR_ SRSRRHRSTSPGHRKGRSRSPG-----GRRKRSP--VREGSEERRAKIAQWNREREQQEG
                 :..:      *:      **       :*.***  *** ***                 

AT5G42820.1     V--------------------------------------
pt022215_POPTR_ ---------------------------------------
pt019921_POPTR_ TANNNVNADSSNNDNGQMQNGSGQEYQQHIPPQQGEYAY
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
pt022215_POPTR_    M A E H L A S I F G T E K D R V N C P F Y F K I R A C R - - - - - - - - H T K P S I S R T L L L S N M Y R R P D M I T P
pt019921_POPTR_    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P S V S P T L L L S N M Y Q R P D M I T P
 
AT5G42820.1     G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K E E D
pt022215_POPTR_    G V D A L G N T I D P R K I Q Q Y F - - - - - - - - - - - - - - - - - E S L N V C D N L A E H M V G N V Y V R F R E Q E
pt019921_POPTR_    G V D A Q G N P I D P R R I Q Q H F E E F Y E D L F E E L R K Y G E I E S L N V C D N L A D H M V G N V Y V Q F R E E E
 
AT5G42820.1     H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L
pt022215_POPTR_    R A S N A L K D L T G R F F P G R L I I V G F S P V T D F C E A T C K Q Y E E N V C N R G G Y C - - - - - - - - - - - -
pt019921_POPTR_    H A S N A L K N L T G R F Y A G R P I I V D F S P V T D F R E A T C R Q Y E E N A C N R G G Y C N F M H L K R I G R E L
 
AT5G42820.1     R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V R D R D R H G N G K R S S D - - - - - -
pt022215_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt019921_POPTR_    R R Q L F G S Y R R - - - - - R R S H S R S R S P Y R H R S H E E H S H S G - - - - - - - R G S G R R Y D D R E H Y Y E
 
AT5G42820.1     - R S E R H D R D G G G R R - - R H G S P - - - - - - - K R S R S P R N V R E G S E E R R A R I E Q W N R E R D - - E G
pt022215_POPTR_    - K K K K W Q C S R G G R G - - C S K S P G H W R G Q G R R K R S P - - V R E R S E E T C - - - - - - - - - - - - - - -
pt019921_POPTR_    S R S R R H R S T S P G H R K G R S R S P G - - - - - G R R K R S P - - V R E G S E E R R A K I A Q W N R E R E Q Q E G
 
AT5G42820.1     V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt022215_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt019921_POPTR_    T A N N N V N A D S S N N D N G Q M Q N G S G Q E Y Q Q H I P P Q Q G E Y A Y
 
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