fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038987 not found in 273aa AT5G42820.1 1st_1st 0.832167832 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
pt038987_POPTR_ MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
                ************************************************************

AT5G42820.1     GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED
pt038987_POPTR_ GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED
                ***.******* ***:***:**************:*************************

AT5G42820.1     HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL
pt038987_POPTR_ QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
                :***********************************:***.************* *.*:*

AT5G42820.1     RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDR------HGNGKRSSD
pt038987_POPTR_ RRKLFGRY-RGYRV-SRSRSRSVSP-RKRERDYDRRERDYRDRDRDRDRDYRGNGR----
                ******** *.**  *******:** ****:. :*.. * *****      :***:    

AT5G42820.1     RSERHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDEGV
pt038987_POPTR_ RNDKYDRE-GGRKRHGS--------TVREGSEERRARIEQWNREREEKQ
                *.:::**: ***:****        .*******************:*
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
pt038987_POPTR_    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
 
AT5G42820.1     G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K E E D
pt038987_POPTR_    G V D A Q G Q P L D P H K I Q E H F E E F Y E D I F E E L N K F G E I E S L N V C D N L A D H M I G N V Y V L F K E E D
 
AT5G42820.1     H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L
pt038987_POPTR_    Q A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q F E E N N C N R G G Y C N F M H V K L I G R D L
 
AT5G42820.1     R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V R D R D R - - - - - - H G N G K R S S D
pt038987_POPTR_    R R K L F G R Y - R G Y R V - S R S R S R S V S P - R K R E R D Y D R R E R D Y R D R D R D R D R D Y R G N G R - - - -
 
AT5G42820.1     R S E R H D R D G G G R R R H G S P K R S R S P R N V R E G S E E R R A R I E Q W N R E R D E G V
pt038987_POPTR_    R N D K Y D R E - G G R K R H G S - - - - - - - - T V R E G S E E R R A R I E Q W N R E R E E K Q
 
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