fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034248 not found in 290aa AT1G27650.1 not_not 0.785547785 III
Os034247 not found in 290aa AT1G27650.1 not_not 0.785547785 III
Os003156 not found in 207aa AT1G27650.1 not_not 0.780885780 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Os034247_Os09t0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP
Os034248_Os09t0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP
Os003156_Os01t0 MAEHLASIFGTEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITP
                **************:******************* ***:*::***::::*** *******

AT5G42820.1     GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED
Os034247_Os09t0 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED
Os034248_Os09t0 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED
Os003156_Os01t0 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED
                *:*.**:*:** ::* .************.*:**:*.*:****:********** *:***

AT5G42820.1     HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL
Os034247_Os09t0 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL
Os034248_Os09t0 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL
Os003156_Os01t0 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFTHVKQI----
                :** *  ** **:*******.:****:*********************** ***:*    

AT5G42820.1     RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRH----------GNGK
Os034247_Os09t0 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR
Os034248_Os09t0 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR
Os003156_Os01t0 -----GTWE-------GSEEKTLWPLQK--------------------------------
                     *  .        ...::  * :                                 

AT5G42820.1     RSSDR-SERHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDEGV-
Os034247_Os09t0 RSSERHRSSYDSD-GSRRRHRS--RTRSP--VRDGSEERRAQIEQWNREREAAQV
Os034248_Os09t0 RSSERHRSSYDSD-GSRRRHRS--RTRSP--VRDGSEERRAQIEQWNREREAAQV
Os003156_Os01t0 --------------ATTRQEPQPKPKPTP--------------------------
                              .  *:. .   . :*
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
Os034247_Os09t0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N K P S V S P T L L L S N M Y L R P D M I T P
Os034248_Os09t0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N K P S V S P T L L L S N M Y L R P D M I T P
Os003156_Os01t0    M A E H L A S I F G T E K D K V N C P F Y F K I G A C R H G D R C S C L H N R P T I S P T V V F A N M Y Q R P D M I T P
 
AT5G42820.1     G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K E E D
Os034247_Os09t0    G I D A Q G N P I D P E K I Q A D F E D F Y E D I F E E L S K Y G E I E S L H V C D N F A D H M I G N V Y V Q F R E E D
Os034248_Os09t0    G I D A Q G N P I D P E K I Q A D F E D F Y E D I F E E L S K Y G E I E S L H V C D N F A D H M I G N V Y V Q F R E E D
Os003156_Os01t0    G V D A Q G Q P I D P R Q M Q E H F E D F Y E D I F E E L S K F G E I E N L N V C D N L A D H M I G N V Y V Q F R E E D
 
AT5G42820.1     H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L
Os034247_Os09t0    Q A A R A L Q A L T G R Y Y S G R P I I V E F S P V S D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K E I G R D L
Os034248_Os09t0    Q A A R A L Q A L T G R Y Y S G R P I I V E F S P V S D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K E I G R D L
Os003156_Os01t0    Q A A A A H T A L Q G R F Y S G R P I I V D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F T H V K Q I - - - -
 
AT5G42820.1     R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V R D R D R H - - - - - - - - - - G N G K
Os034247_Os09t0    R K R L F G H L H R S R R S H S H G R S R S P S P Y H Y R R D Y D R R S S S R S R D H D D Y Y R G G S H D Y Y R G G S R
Os034248_Os09t0    R K R L F G H L H R S R R S H S H G R S R S P S P Y H Y R R D Y D R R S S S R S R D H D D Y Y R G G S H D Y Y R G G S R
Os003156_Os01t0    - - - - - G T W E - - - - - - - G S E E K T L W P L Q K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G42820.1     R S S D R - S E R H D R D G G G R R R H G S P K R S R S P R N V R E G S E E R R A R I E Q W N R E R D E G V -
Os034247_Os09t0    R S S E R H R S S Y D S D - G S R R R H R S - - R T R S P - - V R D G S E E R R A Q I E Q W N R E R E A A Q V
Os034248_Os09t0    R S S E R H R S S Y D S D - G S R R R H R S - - R T R S P - - V R D G S E E R R A Q I E Q W N R E R E A A Q V
Os003156_Os01t0    - - - - - - - - - - - - - - A T T R Q E P Q P K P K P T P - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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