fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023474 SPGFKLLLFRFLLFS in 95/876 AT1G27650.1 1st_not 0.813519813 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFK--IGACRHGDRCSRLHNR-------------------
Sb023474_Sorbi1 ---QL-----QQPVRLAMPTVLQQPAGCSRQSHRGTCLHLRCLPLAVPLLNLCPPLLAAF
                   :*      :  *:  *  ::   *..*:..* : ** *                   

AT5G42820.1     -------------PTISPTLLLSNM-YQRPDMIT-----------------PG-------
Sb023474_Sorbi1 PPRALAPAPGSPAPTAAPVAVVAAVSLAAPAAATTATVVVVIVMVIVTVPGPGRATVAAV
                             ** :*. ::: :    *   *                 **       

AT5G42820.1     -----------------VDPQGQPLDPSKIQDHFE------------DFYEDIFEELNKF
Sb023474_Sorbi1 RARAAAAAAMAPVGAMQVAEQLPPQVPSDLLDVHEVAVSAAVAAVLLELAAGGLPEVRHG
                                 *  *  *  **.: * .*            ::  . : *:.: 

AT5G42820.1     GEVESLNVCDNLADHMIGNVYVLFKEEDHAA---AALQALQGRFYSGRP--IIADFS---
Sb023474_Sorbi1 GE---------LGD-------------DGAARVVAALQSLQ----RARRLLLLAELHVHV
                **         *.*             * **   ****:**     .*   ::*::    

AT5G42820.1     PVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLF------------------G
Sb023474_Sorbi1 PDHVVREVVA-----------------HVEALDLAVLAQLLEDVLVEVLEVLLDPLRVDG
                *   .**...                 **: :.  :  :*:                  *

AT5G42820.1     RYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERH-------
Sb023474_Sorbi1 VPLRVHARGDHVRPLVHVAQQQR-------RGDGRLVVQAGAPVAVAARADLEVEGAVHA
                   * : **.: *.    .:::*       *** *   : *     : *:: .       

AT5G42820.1     ----DRDGGGRRRHGS-----PKRSRSPRNVREGSEERRARIEQWNRERDEGV
Sb023474_Sorbi1 VLLRAKDGRKMLSHGCLIPPLPARFVA--------------------------
                     :**     **.     * *  :
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K - - I G A C R H G D R C S R L H N R - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    - - - Q L - - - - - Q Q P V R L A M P T V L Q Q P A G C S R Q S H R G T C L H L R C L P L A V P L L N L C P P L L A A F
 
AT5G42820.1     - - - - - - - - - - - - - P T I S P T L L L S N M - Y Q R P D M I T - - - - - - - - - - - - - - - - - P G - - - - - - -
Sb023474_Sorbi1    P P R A L A P A P G S P A P T A A P V A V V A A V S L A A P A A A T T A T V V V V I V M V I V T V P G P G R A T V A A V
 
AT5G42820.1     - - - - - - - - - - - - - - - - - V D P Q G Q P L D P S K I Q D H F E - - - - - - - - - - - - D F Y E D I F E E L N K F
Sb023474_Sorbi1    R A R A A A A A A M A P V G A M Q V A E Q L P P Q V P S D L L D V H E V A V S A A V A A V L L E L A A G G L P E V R H G
 
AT5G42820.1     G E V E S L N V C D N L A D H M I G N V Y V L F K E E D H A A - - - A A L Q A L Q G R F Y S G R P - - I I A D F S - - -
Sb023474_Sorbi1    G E - - - - - - - - - L G D - - - - - - - - - - - - - D G A A R V V A A L Q S L Q - - - - R A R R L L L L A E L H V H V
 
AT5G42820.1     P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L R R K L F - - - - - - - - - - - - - - - - - - G
Sb023474_Sorbi1    P D H V V R E V V A - - - - - - - - - - - - - - - - - H V E A L D L A V L A Q L L E D V L V E V L E V L L D P L R V D G
 
AT5G42820.1     R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V R D R D R H G N G K R S S D R S E R H - - - - - - -
Sb023474_Sorbi1    V P L R V H A R G D H V R P L V H V A Q Q Q R - - - - - - - R G D G R L V V Q A G A P V A V A A R A D L E V E G A V H A
 
AT5G42820.1     - - - - D R D G G G R R R H G S - - - - - P K R S R S P R N V R E G S E E R R A R I E Q W N R E R D E G V
Sb023474_Sorbi1    V L L R A K D G R K M L S H G C L I P P L P A R F V A - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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