fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025581 not found in 324aa AT1G27650.1 not_not 0.797202797 III
Sb033058 not found in 436aa AT1G27650.1 not_not 0.792540792 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     -------------------------MAEHLASIFGTEKDRVNC---------------PF
Sb033058_Sorbi1 HNTRPRTVATESSLFCLPFAVPLLNLGPSLLTAF---PDWAPCTPWGATMPAPSSIIIPL
Sb025581_Sorbi1 ------------------------IMAEHLASIFGTEKDRVNC---------------PF
                                         :.  * : *    * . *               *:

AT5G42820.1     YFKIGACR-------HGDRCSRL------HNRP--------------------TISPTLL
Sb033058_Sorbi1 MPATSACSIIIPVMPAASACSIIIPVMPATSSPSTATAATVIITVTVMVVITVTMTPPLW
Sb025581_Sorbi1 YFKIGACR-------HGDRCSRL------HNRP--------------------TISPTLV
                    .**         .. ** :       . *                    *::*.* 

AT5G42820.1     LSNMYQRPDMITPGVDPQGQPLD-PSKIQDHFEDFYE-----DIFEELNK-----FGEVE
Sb033058_Sorbi1 WGASASASPMVPPG---SRTPIQLPPEIPANLLHMHEITVATTVAAVLLKLPTGCFTEVG
Sb025581_Sorbi1 LVNMYQRPDMITPGVDAQGQPID-PRKMQEHFEDFYE-----DIYEELSK-----FGEIE
                     . . *:.**   .  *:: * ::  :: .::*      :   * *     * *: 

AT5G42820.1     SLNVCDN----------------------------LADHMIGNVYVLFKEEDHAAAALQA
Sb033058_Sorbi1 HRRILNNYRAPRVKATLKSIVSCSCLFFLPELDIDIPNHVVSKV----------------
Sb025581_Sorbi1 NLNVCDN----------------------------LADHMIGNVYVQFREEDQAAAAHTA
                  .: :*                            :.:*::.:*                

AT5G42820.1     LQGRFYSGRPIIADFSPVTDFREATCRQYEE-----------------------NSCNRG
Sb033058_Sorbi1 -----------------ITDIQILNLTKLSQLLINVLIEVLKMLLHLLRINWLALSINSR
Sb025581_Sorbi1 LQGRFYSGRPIVVDFSPVTDFREATCRQYEE-----------------------NSCNRG
                                 :**::  .  : .:                        * *  

AT5G42820.1     GYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDV-----
Sb033058_Sorbi1 GY----HIRALIHVSKHKSW-RYSWPVVQTRAAIPMTTSPNLE-----------------
Sb025581_Sorbi1 GYCNFMHVKKIGRDLRKKMFGHYKRPY----RGRSRSPSPHHRRE---RRDRDDYRGAGG
                **    *:: : :  ::* : :*  .      . . : **. .                 

AT5G42820.1     -----RDRDRHGNGKRSSDRSERHDR-DGGGRRRHGS---PKRSRSPRNVREGSEERRAR
Sb033058_Sorbi1 ----------------------------------------VKRAVDP--VLLSAED----
Sb025581_Sorbi1 GGGRGRDDYRGGGGGRRGGGS-RHERYDDGGRRRHGGSPPPRRARSP--VRESSEERRAK
                                                         :*: .*  *  .:*:    

AT5G42820.1     IEQWNRERDEGV-
Sb033058_Sorbi1 -------------
Sb025581_Sorbi1 IEQWNRERDEKQG
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     - - - - - - - - - - - - - - - - - - - - - - - - - M A E H L A S I F G T E K D R V N C - - - - - - - - - - - - - - - P F
Sb033058_Sorbi1    H N T R P R T V A T E S S L F C L P F A V P L L N L G P S L L T A F - - - P D W A P C T P W G A T M P A P S S I I I P L
Sb025581_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - I M A E H L A S I F G T E K D R V N C - - - - - - - - - - - - - - - P F
 
AT5G42820.1     Y F K I G A C R - - - - - - - H G D R C S R L - - - - - - H N R P - - - - - - - - - - - - - - - - - - - - T I S P T L L
Sb033058_Sorbi1    M P A T S A C S I I I P V M P A A S A C S I I I P V M P A T S S P S T A T A A T V I I T V T V M V V I T V T M T P P L W
Sb025581_Sorbi1    Y F K I G A C R - - - - - - - H G D R C S R L - - - - - - H N R P - - - - - - - - - - - - - - - - - - - - T I S P T L V
 
AT5G42820.1     L S N M Y Q R P D M I T P G V D P Q G Q P L D - P S K I Q D H F E D F Y E - - - - - D I F E E L N K - - - - - F G E V E
Sb033058_Sorbi1    W G A S A S A S P M V P P G - - - S R T P I Q L P P E I P A N L L H M H E I T V A T T V A A V L L K L P T G C F T E V G
Sb025581_Sorbi1    L V N M Y Q R P D M I T P G V D A Q G Q P I D - P R K M Q E H F E D F Y E - - - - - D I Y E E L S K - - - - - F G E I E
 
AT5G42820.1     S L N V C D N - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A D H M I G N V Y V L F K E E D H A A A A L Q A
Sb033058_Sorbi1    H R R I L N N Y R A P R V K A T L K S I V S C S C L F F L P E L D I D I P N H V V S K V - - - - - - - - - - - - - - - -
Sb025581_Sorbi1    N L N V C D N - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A D H M I G N V Y V Q F R E E D Q A A A A H T A
 
AT5G42820.1     L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E - - - - - - - - - - - - - - - - - - - - - - - N S C N R G
Sb033058_Sorbi1    - - - - - - - - - - - - - - - - - I T D I Q I L N L T K L S Q L L I N V L I E V L K M L L H L L R I N W L A L S I N S R
Sb025581_Sorbi1    L Q G R F Y S G R P I V V D F S P V T D F R E A T C R Q Y E E - - - - - - - - - - - - - - - - - - - - - - - N S C N R G
 
AT5G42820.1     G Y C N F M H V K Q I S R E L R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V - - - - -
Sb033058_Sorbi1    G Y - - - - H I R A L I H V S K H K S W - R Y S W P V V Q T R A A I P M T T S P N L E - - - - - - - - - - - - - - - - -
Sb025581_Sorbi1    G Y C N F M H V K K I G R D L R K K M F G H Y K R P Y - - - - R G R S R S P S P H H R R E - - - R R D R D D Y R G A G G
 
AT5G42820.1     - - - - - R D R D R H G N G K R S S D R S E R H D R - D G G G R R R H G S - - - P K R S R S P R N V R E G S E E R R A R
Sb033058_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V K R A V D P - - V L L S A E D - - - -
Sb025581_Sorbi1    G G G R G R D D Y R G G G G G R R G G G S - R H E R Y D D G G R R R H G G S P P P R R A R S P - - V R E S S E E R R A K
 
AT5G42820.1     I E Q W N R E R D E G V -
Sb033058_Sorbi1    - - - - - - - - - - - - -
Sb025581_Sorbi1    I E Q W N R E R D E K Q G
 
0