fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023474 SPGFKLLLFRFLLFS in 95/876 AT1G27650.1 1st_not 0.813519813 II
Sb025581 not found in 324aa AT1G27650.1 not_not 0.797202797 III
Sb033058 not found in 436aa AT1G27650.1 not_not 0.792540792 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     -MAEHLASIFGTEKDRVNCPFYFK--IGACRHGDR--CSRLHNRPTISPTLLLSN--MYQ
Sb033058_Sorbi1 ---------HNTRPRTVATES------------------SLFCLPFAVPLLNLGPSLLTA
Sb025581_Sorbi1 IMAEHLASIFGTEKDRVNCPFYFK--IGACRHGDR--CSRLHNRPTISPTLVLVN--MYQ
Sb023474_Sorbi1 ---------QLQQPVRLAMPTVLQQPAGCSRQSHRGTCLHLRCLPLAVPLLNLCPPLLAA
                            .   :                       *   *   * * *    :  

AT5G42820.1     RPD---------------------------------------------------------
Sb033058_Sorbi1 FPDWAPCTPWGATMPAPSSIIIPLMPATSACSIIIPVMPAASACSIIIPVMPATSSPSTA
Sb025581_Sorbi1 RPD---------------------------------------------------------
Sb023474_Sorbi1 FPP-------RALAPAPGS-------------------PAPTAAPVAVVAAVSLAAPAAA
                 *                                                          

AT5G42820.1     -------------------------------------MITPGV---DPQGQPLDPSKIQD
Sb033058_Sorbi1 TAATVIITVTVMVVITVT----MTPPLWWGASASASPMVPPGS-RTPIQLPPEIPANLLH
Sb025581_Sorbi1 -------------------------------------MITPGV---DAQGQPIDPRKMQE
Sb023474_Sorbi1 TTATVVV-VIVMVIVTVPGPGRATVAAVRARAAAAAAMAPVGAMQVAEQLPPQVPSDLLD
                                                     * . *      *  *  * .: .

AT5G42820.1     HFE------------DFYEDIFEELNKFGEVES------------------------LNV
Sb033058_Sorbi1 MHEITVATTVAAVLLKLPTGCFTEVGHRRILNNYRAPRVKATLKSIVSCSCLFFLPELDI
Sb025581_Sorbi1 HFE------------DFYEDIYEELSKFGEIEN------------------------LNV
Sb023474_Sorbi1 VHEVAVSAAVAAVLLELAAGGLPEVRHGGELGDDGAARVVAALQSLQRARRLLLLAELHV
                 .*            .:  .   *: :   : .                        *.:

AT5G42820.1     CDNLADHMIGNVYVLFKEEDHAAAAL-----------------------QALQGRFYSGR
Sb033058_Sorbi1 --DIPNHVVSKVITDIQILNLTKLSQLLINVLIEVLKMLLHLLRINWLALSINSRGYHIR
Sb025581_Sorbi1 CDNLADHMIGNVYVQFREEDQAAAAH-----------------------TALQGRFYSGR
Sb023474_Sorbi1 --HVPDHVVREVVAHVEALDLAVLAQLLEDVLVEVLEVLLDPLRVDGVPLRVHARGDHVR
                  .:.:*:: :* . ..  : :  :                          ::.*    *

AT5G42820.1     PIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSR
Sb033058_Sorbi1 ALI-------------------------------HVS-----------------------
Sb025581_Sorbi1 PIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDLRKKMFGHYKRPY----R
Sb023474_Sorbi1 PLV-------------------------------HVA-----------------------
                .::                               **                        

AT5G42820.1     SRSRSISPRRKREHSRERERGDV----------RDRDRHGNGKRSSDRSERHDR-DGGGR
Sb033058_Sorbi1 --------------------------------------------------KHKS------
Sb025581_Sorbi1 GRSRSPSPHHRRE---RRDRDDYRGAGGGGGRGRDDYRGGGGGRRGGGS-RHERYDDGGR
Sb023474_Sorbi1 --------------------------------------------------QQQR------
                                                                  ::.       

AT5G42820.1     RRHGS---PKRSRSPRNVREGSEERRARIEQWNRERDEGV-----------------
Sb033058_Sorbi1 WRYSWPVVQTRAAIPMTTSPNLEVKRAVDPVLLSAED--------------------
Sb025581_Sorbi1 RRHGGSPPPRRARSP--VRESSEERRAKIEQWNRERDEKQG----------------
Sb023474_Sorbi1 RGDGRLVVQAGAPVAVAARADLEVEGAVHAVLLRAKDGRKMLSHGCLIPPLPARFVA
                   .       :  .  .  . * . *        .*
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     - M A E H L A S I F G T E K D R V N C P F Y F K - - I G A C R H G D R - - C S R L H N R P T I S P T L L L S N - - M Y Q
Sb033058_Sorbi1    - - - - - - - - - H N T R P R T V A T E S - - - - - - - - - - - - - - - - - - S L F C L P F A V P L L N L G P S L L T A
Sb025581_Sorbi1    I M A E H L A S I F G T E K D R V N C P F Y F K - - I G A C R H G D R - - C S R L H N R P T I S P T L V L V N - - M Y Q
Sb023474_Sorbi1    - - - - - - - - - Q L Q Q P V R L A M P T V L Q Q P A G C S R Q S H R G T C L H L R C L P L A V P L L N L C P P L L A A
 
AT5G42820.1     R P D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033058_Sorbi1    F P D W A P C T P W G A T M P A P S S I I I P L M P A T S A C S I I I P V M P A A S A C S I I I P V M P A T S S P S T A
Sb025581_Sorbi1    R P D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    F P P - - - - - - - R A L A P A P G S - - - - - - - - - - - - - - - - - - - P A P T A A P V A V V A A V S L A A P A A A
 
AT5G42820.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I T P G V - - - D P Q G Q P L D P S K I Q D
Sb033058_Sorbi1    T A A T V I I T V T V M V V I T V T - - - - M T P P L W W G A S A S A S P M V P P G S - R T P I Q L P P E I P A N L L H
Sb025581_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I T P G V - - - D A Q G Q P I D P R K M Q E
Sb023474_Sorbi1    T T A T V V V - V I V M V I V T V P G P G R A T V A A V R A R A A A A A A M A P V G A M Q V A E Q L P P Q V P S D L L D
 
AT5G42820.1     H F E - - - - - - - - - - - - D F Y E D I F E E L N K F G E V E S - - - - - - - - - - - - - - - - - - - - - - - - L N V
Sb033058_Sorbi1    M H E I T V A T T V A A V L L K L P T G C F T E V G H R R I L N N Y R A P R V K A T L K S I V S C S C L F F L P E L D I
Sb025581_Sorbi1    H F E - - - - - - - - - - - - D F Y E D I Y E E L S K F G E I E N - - - - - - - - - - - - - - - - - - - - - - - - L N V
Sb023474_Sorbi1    V H E V A V S A A V A A V L L E L A A G G L P E V R H G G E L G D D G A A R V V A A L Q S L Q R A R R L L L L A E L H V
 
AT5G42820.1     C D N L A D H M I G N V Y V L F K E E D H A A A A L - - - - - - - - - - - - - - - - - - - - - - - Q A L Q G R F Y S G R
Sb033058_Sorbi1    - - D I P N H V V S K V I T D I Q I L N L T K L S Q L L I N V L I E V L K M L L H L L R I N W L A L S I N S R G Y H I R
Sb025581_Sorbi1    C D N L A D H M I G N V Y V Q F R E E D Q A A A A H - - - - - - - - - - - - - - - - - - - - - - - T A L Q G R F Y S G R
Sb023474_Sorbi1    - - H V P D H V V R E V V A H V E A L D L A V L A Q L L E D V L V E V L E V L L D P L R V D G V P L R V H A R G D H V R
 
AT5G42820.1     P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L R R K L F G R Y R R S Y R R G S R
Sb033058_Sorbi1    A L I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H V S - - - - - - - - - - - - - - - - - - - - - - -
Sb025581_Sorbi1    P I V V D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K K I G R D L R K K M F G H Y K R P Y - - - - R
Sb023474_Sorbi1    P L V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H V A - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G42820.1     S R S R S I S P R R K R E H S R E R E R G D V - - - - - - - - - - R D R D R H G N G K R S S D R S E R H D R - D G G G R
Sb033058_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K H K S - - - - - -
Sb025581_Sorbi1    G R S R S P S P H H R R E - - - R R D R D D Y R G A G G G G G R G R D D Y R G G G G G R R G G G S - R H E R Y D D G G R
Sb023474_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q Q R - - - - - -
 
AT5G42820.1     R R H G S - - - P K R S R S P R N V R E G S E E R R A R I E Q W N R E R D E G V - - - - - - - - - - - - - - - - -
Sb033058_Sorbi1    W R Y S W P V V Q T R A A I P M T T S P N L E V K R A V D P V L L S A E D - - - - - - - - - - - - - - - - - - - -
Sb025581_Sorbi1    R R H G G S P P P R R A R S P - - V R E S S E E R R A K I E Q W N R E R D E K Q G - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    R G D G R L V V Q A G A P V A V A A R A D L E V E G A V H A V L L R A K D G R K M L S H G C L I P P L P A R F V A
 
0