fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034009 not found in 315aa AT5G42820.1 not_1st 0.804195804 II
Gm052592 not found in 314aa AT5G42820.1 not_1st 0.738927738 II
Gm007525 not found in 314aa AT5G42820.1 not_1st 0.738927738 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM---
gm007525_Glyma0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMS
gm034009_Glyma1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDM---
gm052592_Glyma1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMN
                *************************************.:*:****::**********   

AT5G42820.1     -ITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLF
gm007525_Glyma0 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF
gm034009_Glyma1 -ITPGVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQF
gm052592_Glyma1 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF
                 **   :.: :.:** *:****::****:*:**.*:* ::***:********:***** *

AT5G42820.1     KEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQI
gm007525_Glyma0 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI
gm034009_Glyma1 REEEHAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI
gm052592_Glyma1 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI
                :**:*** *:  * ****:*****.******************* ***********:*:*

AT5G42820.1     SRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERE--RGDVR---DRDRH--GNG
gm007525_Glyma0 SRDLRRKLFGRNRRWNGR-SGSRSR--SPPRNRNHGENSHSGRGSGRR--DFDRSHGPHG
gm034009_Glyma1 SRELRRQLFG---KSHGRHSRSRSR--SPYRHRSHEERSH--RSHSRKYDDRDHHHESRS
gm052592_Glyma1 SRDLRRKLFGRNRRWNGR-SGSRSK--SPPRNRNHGEHLHSGRGSGRR--DFDRSHGHHG
                **:***:***   :   * * ***:  ** *:*.* .. .  *.  *   * *:    ..

AT5G42820.1     KRSSDRSERHDRDGGGRRRHGSP--KRSRSPRNVREGSEERRARIEQWNRERD-------
gm007525_Glyma0 RRPRSRSPRYRG-----KRSRSP-VGRDRSP-PIRESSAERRAKIEQWNREKEQGDTG--
gm034009_Glyma1 RRHRSTSPRHRR---GRSRSRSPGGRRHHSP--VRDGSEERRARIEQWNREREDQEPGYK
gm052592_Glyma1 RRPRSRSPRYRG-----KRSRSP-VGRDRSP-PIRENSAERRAKIEQWNREKEQGETS--
                :*  . * *:        *  **   * :**  :*:.* ****:*******::       

AT5G42820.1     ----------------------------EGV---
gm007525_Glyma0 ------NMNNSKSSDDYQEQSVAQNGSESGNHQI
gm034009_Glyma1 VNAEEINNGNASKHHGHQQQEQEPQSPQEGQ---
gm052592_Glyma1 ------NKNNTKSNDDYQEQSVAQNGSESGNHQI
                                            .*
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M - - -
gm007525_Glyma0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P T I S P T L V L S N M Y Q R P D M N M S
gm034009_Glyma1    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P S I S P T I L L S N M Y Q R P D M - - -
gm052592_Glyma1    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P T I S P T L V L S N M Y Q R P D M N M N
 
AT5G42820.1     - I T P G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F
gm007525_Glyma0    I I T N P D Q P Q P Q S L D P D K V Q D H F D D F Y E D L F E E L S K Y G P I Q S L N I C D N L A D H M V G N V Y V Q F
gm034009_Glyma1    - I T P G V D A H G H P I D P R K I Q D H F E E F Y E D L F D E L S K Y G D I E S L N V C D N L A D H M V G N V Y V Q F
gm052592_Glyma1    I I T N P D Q P Q P Q S L D P D K V Q D H F D D F Y E D L F E E L S K Y G P I Q S L N I C D N L A D H M V G N V Y V Q F
 
AT5G42820.1     K E E D H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I
gm007525_Glyma0    R E E D H A A N A L M N L T G R F Y S G R P I I V D F S P V T D F R E A T C R Q Y E E N V C N R G G Y C N F M H L K K I
gm034009_Glyma1    R E E E H A A N A V R N L T G R F Y A G R P I I V D F S P V T D F R E A T C R Q Y E E N T C N R G G Y C N F M H L K R I
gm052592_Glyma1    R E E D H A A N A L M N L T G R F Y S G R P I I V D F S P V T D F R E A T C R Q Y E E N V C N R G G Y C N F M H L K K I
 
AT5G42820.1     S R E L R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E - - R G D V R - - - D R D R H - - G N G
gm007525_Glyma0    S R D L R R K L F G R N R R W N G R - S G S R S R - - S P P R N R N H G E N S H S G R G S G R R - - D F D R S H G P H G
gm034009_Glyma1    S R E L R R Q L F G - - - K S H G R H S R S R S R - - S P Y R H R S H E E R S H - - R S H S R K Y D D R D H H H E S R S
gm052592_Glyma1    S R D L R R K L F G R N R R W N G R - S G S R S K - - S P P R N R N H G E H L H S G R G S G R R - - D F D R S H G H H G
 
AT5G42820.1     K R S S D R S E R H D R D G G G R R R H G S P - - K R S R S P R N V R E G S E E R R A R I E Q W N R E R D - - - - - - -
gm007525_Glyma0    R R P R S R S P R Y R G - - - - - K R S R S P - V G R D R S P - P I R E S S A E R R A K I E Q W N R E K E Q G D T G - -
gm034009_Glyma1    R R H R S T S P R H R R - - - G R S R S R S P G G R R H H S P - - V R D G S E E R R A R I E Q W N R E R E D Q E P G Y K
gm052592_Glyma1    R R P R S R S P R Y R G - - - - - K R S R S P - V G R D R S P - P I R E N S A E R R A K I E Q W N R E K E Q G E T S - -
 
AT5G42820.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - E G V - - -
gm007525_Glyma0    - - - - - - N M N N S K S S D D Y Q E Q S V A Q N G S E S G N H Q I
gm034009_Glyma1    V N A E E I N N G N A S K H H G H Q Q Q E Q E P Q S P Q E G Q - - -
gm052592_Glyma1    - - - - - - N K N N T K S N D D Y Q E Q S V A Q N G S E S G N H Q I
 
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