fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018563 not found in 271aa AT1G27650.1 not_not 0.794871794 III
Gm018562 not found in 271aa AT1G27650.1 not_not 0.794871794 III
Gm053476 not found in 268aa AT1G27650.1 not_not 0.790209790 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
gm018563_Glyma0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP
gm018562_Glyma0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP
gm053476_Glyma2 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP
                ****************************************:*******************

AT5G42820.1     GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED
gm018563_Glyma0 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED
gm018562_Glyma0 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED
gm053476_Glyma2 GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED
                *******.*** ***:********** ** ***::******************* *:***

AT5G42820.1     HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL
gm018563_Glyma0 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL
gm018562_Glyma0 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL
gm053476_Glyma2 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL
                :** **:**:****..********************:***************** *.*:*

AT5G42820.1     RRKLFGRYRR----SYRRG----SRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRS
gm018563_Glyma0 RRRLFGRHHRGGSGTYHRVSRSRSRSRSRSGSPR----HRRERHERDSR-------GRRS
gm018562_Glyma0 RRRLFGRHHRGGSGTYHRVSRSRSRSRSRSGSPR----HRRERHERDSR-------GRRS
gm053476_Glyma2 RRRLFGRNHRGGSGTYHRV--SRSRSRSRSASPR----YRRERRESDSR------GGRRS
                **:**** :*    :*:*     ******* ***    : ***.. * *       *:**

AT5G42820.1     SDRSERHDRDGGGRRRHGS-PKRSRSPRNVREGSEERRARIEQWNRERDEGV
gm018563_Glyma0 RER-EYRERDGGGRRRHGS-P--------AREGSEERRARIEQWNREREEKQ
gm018562_Glyma0 RER-EYRERDGGGRRRHGS-P--------AREGSEERRARIEQWNREREEKQ
gm053476_Glyma2 RE----RDGSGGRRRQHGSPP--------AREGSEERRARIEQWNREREENK
                 :    :: .** **:*** *        .******************:*
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
gm018563_Glyma0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P S I S P T L L L S N M Y Q R P D M I T P
gm018562_Glyma0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P S I S P T L L L S N M Y Q R P D M I T P
gm053476_Glyma2    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P S I S P T L L L S N M Y Q R P D M I T P
 
AT5G42820.1     G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K E E D
gm018563_Glyma0    G V D P Q G Q P L D P R K I Q Q H F E D F Y E D I F T E L A K F G D I E S L N V C D N L A D H M I G N V Y V Q F R E E D
gm018562_Glyma0    G V D P Q G Q P L D P R K I Q Q H F E D F Y E D I F T E L A K F G D I E S L N V C D N L A D H M I G N V Y V Q F R E E D
gm053476_Glyma2    G V D P Q G Q T L D P R K I Q Q H F E D F Y E D I F T E L A K F G E I E S L N V C D N L A D H M I G N V Y V Q F R E E D
 
AT5G42820.1     H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L
gm018563_Glyma0    Q A A K A L H A L H G R F Y N A R P I I A D F S P V T D F R E A T C R Q F E E N S C N R G G Y C N F M H V K L I G R D L
gm018562_Glyma0    Q A A K A L H A L H G R F Y N A R P I I A D F S P V T D F R E A T C R Q F E E N S C N R G G Y C N F M H V K L I G R D L
gm053476_Glyma2    Q A A K A L H A L R G R F Y N A R P I I A D F S P V T D F R E A T C R Q F E E N S C N R G G Y C N F M H V K L I G R D L
 
AT5G42820.1     R R K L F G R Y R R - - - - S Y R R G - - - - S R S R S R S I S P R R K R E H S R E R E R G D V R D R D R H G N G K R S
gm018563_Glyma0    R R R L F G R H H R G G S G T Y H R V S R S R S R S R S R S G S P R - - - - H R R E R H E R D S R - - - - - - - G R R S
gm018562_Glyma0    R R R L F G R H H R G G S G T Y H R V S R S R S R S R S R S G S P R - - - - H R R E R H E R D S R - - - - - - - G R R S
gm053476_Glyma2    R R R L F G R N H R G G S G T Y H R V - - S R S R S R S R S A S P R - - - - Y R R E R R E S D S R - - - - - - G G R R S
 
AT5G42820.1     S D R S E R H D R D G G G R R R H G S - P K R S R S P R N V R E G S E E R R A R I E Q W N R E R D E G V
gm018563_Glyma0    R E R - E Y R E R D G G G R R R H G S - P - - - - - - - - A R E G S E E R R A R I E Q W N R E R E E K Q
gm018562_Glyma0    R E R - E Y R E R D G G G R R R H G S - P - - - - - - - - A R E G S E E R R A R I E Q W N R E R E E K Q
gm053476_Glyma2    R E - - - - R D G S G G R R R Q H G S P P - - - - - - - - A R E G S E E R R A R I E Q W N R E R E E N K
 
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