fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G42820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034010 not found in 315aa AT5G42820.1 1st_1st 0.804195804 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G42820.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
gm034010_Glyma1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
                *************************************.:*:****:**************

AT5G42820.1     GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED
gm034010_Glyma1 GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE
                ***.:*:*:** *******:****:*:**.*:*::*************:***** *:**:

AT5G42820.1     HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL
gm034010_Glyma1 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
                *** *:: * ****:*****.*******************:***********:*:*****

AT5G42820.1     RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR---DRDRH--GNGKRSSDR
gm034010_Glyma1 RRQLFG---KSHGRHSRSRSR--SPYRHRSHEERSHRSHSRKYDDRDHHHESRSRRHRST
                **:***   :*: * ******  ** *:*.*... .*.. *   ***:*  ...:*  . 

AT5G42820.1     SERHDRDGGGRRRHGSP--KRSRSPRNVREGSEERRARIEQWNRERD-------------
gm034010_Glyma1 SPRHRR---GRSRSRSPGGRRHHSP--VRDGSEERRARIEQWNREREDQEPGYKVNAEEI
                * ** *   ** *  **  :* :**  **:****************:             

AT5G42820.1     ----------------------EGV
gm034010_Glyma1 NNGNASKHHGHQQQEQEPQSPQEGQ
                                      **
BoxShade v3.31 C (beta, 970507) Output
AT5G42820.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
gm034010_Glyma1    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H T K P S I S P T I L L S N M Y Q R P D M I T P
 
AT5G42820.1     G V D P Q G Q P L D P S K I Q D H F E D F Y E D I F E E L N K F G E V E S L N V C D N L A D H M I G N V Y V L F K E E D
gm034010_Glyma1    G V D A H G H P I D P R K I Q D H F E E F Y E D L F D E L S K Y G D I E S L N V C D N L A D H M V G N V Y V Q F R E E E
 
AT5G42820.1     H A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N S C N R G G Y C N F M H V K Q I S R E L
gm034010_Glyma1    H A A N A V R N L T G R F Y A G R P I I V D F S P V T D F R E A T C R Q Y E E N T C N R G G Y C N F M H L K R I S R E L
 
AT5G42820.1     R R K L F G R Y R R S Y R R G S R S R S R S I S P R R K R E H S R E R E R G D V R - - - D R D R H - - G N G K R S S D R
gm034010_Glyma1    R R Q L F G - - - K S H G R H S R S R S R - - S P Y R H R S H E E R S H R S H S R K Y D D R D H H H E S R S R R H R S T
 
AT5G42820.1     S E R H D R D G G G R R R H G S P - - K R S R S P R N V R E G S E E R R A R I E Q W N R E R D - - - - - - - - - - - - -
gm034010_Glyma1    S P R H R R - - - G R S R S R S P G G R R H H S P - - V R D G S E E R R A R I E Q W N R E R E D Q E P G Y K V N A E E I
 
AT5G42820.1     - - - - - - - - - - - - - - - - - - - - - - E G V
gm034010_Glyma1    N N G N A S K H H G H Q Q Q E Q E P Q S P Q E G Q
 
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