fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049728 not found in 287aa AT5G43290.1 1st_1st 0.298611111 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43290.1     -MEE--------EGYQWARRCGNNAVEDPFVYE-----PPLFFLPQDQHHMHGLMPNEDF
gm049728_Glyma1 MMEEVVMTTSWSEGSE----------DDDLVRELLDDGSPLLIEPPNTTTKASSSDDQDQ
                 ***        ** :          :* :* *     .**:: * :     .   ::* 

AT5G43290.1     IANKFVTSTLYSGPRIQDIANALALVEPLTHPVREISKSTVPLLERSTLSKVD-RYTLKV
gm049728_Glyma1 AFNKFI-SNIYSGPTISDIENALSVTNQRDH-FPQLSSARVSILERG-LSKIENKYTLKI
                  ***: *.:**** *.** ***::.:   * . ::*.: *.:***. ***:: :****:

AT5G43290.1     KNNSNGMCDDGYKWRKYGQKSIKNSPNPRSYYKCTNPICNAKKQVERSIDESNTYIITYE
gm049728_Glyma1 KCFGNVMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYE
                *  .* * ************************:**** *.******** ::.:* *****

AT5G43290.1     GFHFHYTYPFFLPDKTRQW----PNKKTKIHKHNAQ-DMNKKSQTQEESKEAQLGEL--T
gm049728_Glyma1 GLHLHFAYPYFLMGQLQQSNSHPPIKKSKPISPQAQAQAHREDYVQEAQSNATWGMMSST
                *:*:*::**:** .: :*     * **:*  . :** : :::. .** ..:*  * :  *

AT5G43290.1     NQNHPVNKAQENTPANLEEGLFFPVDQCRPQQGLLEDVVAPAM-------------KNIP
gm049728_Glyma1 SLDSTLDMAQENLGS----------------QGLLEDMV-PFMCSHKIFLFFVQFSSNIS
                . : .:: ****  :                ******:* * *             .**.

AT5G43290.1     TRDSVLTAS--------
gm049728_Glyma1 SLDFNLLHHLLYRWLKF
                : *  *
BoxShade v3.31 C (beta, 970507) Output
AT5G43290.1     - M E E - - - - - - - - E G Y Q W A R R C G N N A V E D P F V Y E - - - - - P P L F F L P Q D Q H H M H G L M P N E D F
gm049728_Glyma1    M M E E V V M T T S W S E G S E - - - - - - - - - - D D D L V R E L L D D G S P L L I E P P N T T T K A S S S D D Q D Q
 
AT5G43290.1     I A N K F V T S T L Y S G P R I Q D I A N A L A L V E P L T H P V R E I S K S T V P L L E R S T L S K V D - R Y T L K V
gm049728_Glyma1    A F N K F I - S N I Y S G P T I S D I E N A L S V T N Q R D H - F P Q L S S A R V S I L E R G - L S K I E N K Y T L K I
 
AT5G43290.1     K N N S N G M C D D G Y K W R K Y G Q K S I K N S P N P R S Y Y K C T N P I C N A K K Q V E R S I D E S N T Y I I T Y E
gm049728_Glyma1    K C F G N V M G D D G Y K W R K Y G Q K S I K N S P N P R S Y Y R C T N P R C S A K K Q V E R S N E D P D T L I I T Y E
 
AT5G43290.1     G F H F H Y T Y P F F L P D K T R Q W - - - - P N K K T K I H K H N A Q - D M N K K S Q T Q E E S K E A Q L G E L - - T
gm049728_Glyma1    G L H L H F A Y P Y F L M G Q L Q Q S N S H P P I K K S K P I S P Q A Q A Q A H R E D Y V Q E A Q S N A T W G M M S S T
 
AT5G43290.1     N Q N H P V N K A Q E N T P A N L E E G L F F P V D Q C R P Q Q G L L E D V V A P A M - - - - - - - - - - - - - K N I P
gm049728_Glyma1    S L D S T L D M A Q E N L G S - - - - - - - - - - - - - - - - Q G L L E D M V - P F M C S H K I F L F F V Q F S S N I S
 
AT5G43290.1     T R D S V L T A S - - - - - - - -
gm049728_Glyma1    S L D F N L L H H L L Y R W L K F
 
0