fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034953 not found in 131aa AT5G43410.1 1st_1st 0.574074074 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43410.1     MD---QGGRGVGAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQ
Os034953_Os09t0 MDHHHQQQQQEGELVAKYRGVRRRPWGKFAAEIRDSSRHGVRVWLGTFDTAEEAARAYDR
                **   *  :  *   .************:******* :** ******************:

AT5G43410.1     AAYSMRGQAAILNFPHEYNM-GSGVSSSTAMAGSSSASASASSSSR-QVFEFEYLDDSVL
Os034953_Os09t0 SAYSMRGANAVLNFPADAHIYARQLHNNNAAAGSSSSSSAAAAAARPPPIEFEYLDDHVL
                :******  *:**** : :: .  : ...* *****:*::*::::*   :******* **

AT5G43410.1     EELLEEGEKPNKGKKK
Os034953_Os09t0 QEMLRD-HTTNK----
                :*:*.: ...**
BoxShade v3.31 C (beta, 970507) Output
AT5G43410.1     M D - - - Q G G R G V G A E H G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E E A A R A Y D Q
Os034953_Os09t0    M D H H H Q Q Q Q Q E G E L V A K Y R G V R R R P W G K F A A E I R D S S R H G V R V W L G T F D T A E E A A R A Y D R
 
AT5G43410.1     A A Y S M R G Q A A I L N F P H E Y N M - G S G V S S S T A M A G S S S A S A S A S S S S R - Q V F E F E Y L D D S V L
Os034953_Os09t0    S A Y S M R G A N A V L N F P A D A H I Y A R Q L H N N N A A A G S S S S S S A A A A A A R P P P I E F E Y L D D H V L
 
AT5G43410.1     E E L L E E G E K P N K G K K K
Os034953_Os09t0    Q E M L R D - H T T N K - - - -
 
0