fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016375 not found in 444aa AT5G47220.1 1st_not 0.493827160 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43410.1     -----------------------------MDQ----------------------------
pp016375_Pp1s2_ MTAEILSQHWEAQGLGWGCDTQRIEEERVLDNFHQCGVPEVELQQQIFFPESYFYFPNAL
                                             :*:                            

AT5G43410.1     -----------------------------------GGRGVGA------------------
pp016375_Pp1s2_ CSNVPFQLDTNSFPCSPSQFSDGTRSPPSSSQRSDGARSSGAVLSEQTDEACSVASLGSS
                                                   *.*. **                  

AT5G43410.1     ------------------------------------------------------------
pp016375_Pp1s2_ KGIDQWATTLKRTLGENFTEEVRPKMVPYIDVDDFLCFDNVQDQPASPPSTEASSLCEDF
                                                                            

AT5G43410.1     ------------------------------------------------------------
pp016375_Pp1s2_ DKAMHSGTERRPNSCTIKRPPPPLSIPSTSQPTSSLFRDIANKPVSPWRSKRIQCQIPEV
                                                                            

AT5G43410.1     -----------------------------EHGK---------------------------
pp016375_Pp1s2_ LCTDFSQAEGFPSLDQNDLEDLFSFSLLKETGQNTIACPIPRELASACVKVEQDCQPRPT
                                             * *:                           

AT5G43410.1     -------------YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYS
pp016375_Pp1s2_ TTPQKLAKQPQPHYRGVRQRPWGKFAAEIRDSAKNGARVWLGTFDTAEQAALAYDRAALN
                             *****:*****:******* *:* ***********:** ***:** .

AT5G43410.1     MRGQAAILNFPHEYNMGSGVSSSTAMA----------GSSSASASASSSSRQ--------
pp016375_Pp1s2_ MRGSRALLNFP--------LKATTALSNPESLPRPPLSSSSCRQAAKNSQKQRCIHSLTK
                ***. *:****        :.::**::          .***.  :*..*.:*        

AT5G43410.1     ---------------VFEFEYLDDSVLEELLEEGEKPNKGKKK
pp016375_Pp1s2_ IAIASSNKRPSAVASAESYELKRPRVKDELLV-----------
                               . .:*     * :***
BoxShade v3.31 C (beta, 970507) Output
AT5G43410.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp016375_Pp1s2_    M T A E I L S Q H W E A Q G L G W G C D T Q R I E E E R V L D N F H Q C G V P E V E L Q Q Q I F F P E S Y F Y F P N A L
 
AT5G43410.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G R G V G A - - - - - - - - - - - - - - - - - -
pp016375_Pp1s2_    C S N V P F Q L D T N S F P C S P S Q F S D G T R S P P S S S Q R S D G A R S S G A V L S E Q T D E A C S V A S L G S S
 
AT5G43410.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp016375_Pp1s2_    K G I D Q W A T T L K R T L G E N F T E E V R P K M V P Y I D V D D F L C F D N V Q D Q P A S P P S T E A S S L C E D F
 
AT5G43410.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp016375_Pp1s2_    D K A M H S G T E R R P N S C T I K R P P P P L S I P S T S Q P T S S L F R D I A N K P V S P W R S K R I Q C Q I P E V
 
AT5G43410.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E H G K - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp016375_Pp1s2_    L C T D F S Q A E G F P S L D Q N D L E D L F S F S L L K E T G Q N T I A C P I P R E L A S A C V K V E Q D C Q P R P T
 
AT5G43410.1     - - - - - - - - - - - - - Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E E A A R A Y D Q A A Y S
pp016375_Pp1s2_    T T P Q K L A K Q P Q P H Y R G V R Q R P W G K F A A E I R D S A K N G A R V W L G T F D T A E Q A A L A Y D R A A L N
 
AT5G43410.1     M R G Q A A I L N F P H E Y N M G S G V S S S T A M A - - - - - - - - - - G S S S A S A S A S S S S R Q - - - - - - - -
pp016375_Pp1s2_    M R G S R A L L N F P - - - - - - - - L K A T T A L S N P E S L P R P P L S S S S C R Q A A K N S Q K Q R C I H S L T K
 
AT5G43410.1     - - - - - - - - - - - - - - - V F E F E Y L D D S V L E E L L E E G E K P N K G K K K
pp016375_Pp1s2_    I A I A S S N K R P S A V A S A E S Y E L K R P R V K D E L L V - - - - - - - - - - -
 
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