fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034390 not found in 219aa AT5G43650.1 1st_1st 0.299781181 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43650.1     MDNFFLGLSCQEE---NNFWDLIVADISGDRSVSVPI-RSAFRSYMKDTELRMMSPKISS
pt034390_POPTR_ MDGFF-----QDEWQGDGFWNEI-----------GPVNQGAFVPYIRRAGAGSESSSMGA
                **.**     *:*   :.**: *            *: :.** .*:: :     *..:.:

AT5G43650.1     SKVNVKKRMVNLLRKNWEEKKNTVAPEKERSRRHMLKERTRREKQKQSYLALHSLLPFAT
pt034390_POPTR_ HPTNMNKRMVEFMRRSFPVNIGAQEPGSERCNRHMMSERLRRERERHGYLALHSLLPLGT
                  .*::****:::*:.:  : .:  * .**..***:.** ***::::.*********:.*

AT5G43650.1     KNDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSAKDGHDEMSETKVRVNLKEPLSGL
pt034390_POPTR_ KKDKNSIMQMAAKRIQELETYKRILERRNGEIEEKLAGSGIVNVESTKIRIEVANPTSGV
                *:*****:: *...* :*:  *: * **   **** * .*  ::..**:*::: :* **:

AT5G43650.1     DSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRVERRLQETEWKLL
pt034390_POPTR_ DPMVDVLKCLKSLGAKTRSIQSQISDQQLVAVMDIETEIEAAEIENAVKRTLARY-----
                *.*::.*: ***:*:* :::::::* *:: *.* ***:*.. *:*: *:* * .      

AT5G43650.1     FLPEASFYKDY
pt034390_POPTR_ -----------
BoxShade v3.31 C (beta, 970507) Output
AT5G43650.1     M D N F F L G L S C Q E E - - - N N F W D L I V A D I S G D R S V S V P I - R S A F R S Y M K D T E L R M M S P K I S S
pt034390_POPTR_    M D G F F - - - - - Q D E W Q G D G F W N E I - - - - - - - - - - - G P V N Q G A F V P Y I R R A G A G S E S S S M G A
 
AT5G43650.1     S K V N V K K R M V N L L R K N W E E K K N T V A P E K E R S R R H M L K E R T R R E K Q K Q S Y L A L H S L L P F A T
pt034390_POPTR_    H P T N M N K R M V E F M R R S F P V N I G A Q E P G S E R C N R H M M S E R L R R E R E R H G Y L A L H S L L P L G T
 
AT5G43650.1     K N D K N S I V E K A V D E I A K L Q R L K K E L V R R I K V I E E K S A K D G H D E M S E T K V R V N L K E P L S G L
pt034390_POPTR_    K K D K N S I M Q M A A K R I Q E L E T Y K R I L E R R N G E I E E K L A G S G I V N V E S T K I R I E V A N P T S G V
 
AT5G43650.1     D S M L E A L H Y L K S M G T K L K T V H A N F S P Q E F S A T M T I E T Q I R G E E V E K R V E R R L Q E T E W K L L
pt034390_POPTR_    D P M V D V L K C L K S L G A K T R S I Q S Q I S D Q Q L V A V M D I E T E I E A A E I E N A V K R T L A R Y - - - - -
 
AT5G43650.1     F L P E A S F Y K D Y
pt034390_POPTR_    - - - - - - - - - - -
 
0