fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020266 not found in 548aa AT5G43650.1 1st_1st 0.201312910 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43650.1     --MDNFFLGLSCQEENNFWDLIV----------------ADISGDRSVSVPIRSAFRSYM
Sb020266_Sorbi1 MQMDSYNYASFFHDEAAFYPHVAVPPSSPELPFGLIASPGEMEPEPPFAPPMPTAFQDYD
                  **.:  .   ::*  *:  :.                .::. : ..: *: :**:.* 

AT5G43650.1     KDTELRMMSPKISSSKVNVKKRMVNLLRKNWE-----------EKKNTVAPEKERSR---
Sb020266_Sorbi1 YPGAAVGVGAGAPFGGPSVHRQVMDALGGDGQREQSMAMAEDGEEEQEQEPRRQRQRQQP
                       :..  . .  .*:::::: *  : :           *:::   *.::*.*   

AT5G43650.1     --------------RHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKL
Sb020266_Sorbi1 AGAAAAAVESSRGFRHMMRERQRREKLSQSYADLHALVASRSRGDKNSIVQAAAIYIHEL
                              ***::** **** .***  **:*:.  ::.******: *.  * :*

AT5G43650.1     QRLKKELVRRIKVIEEKSAKDGHDEMSE-TKVRVNLKEPLSGLDSMLEALHYLKSMGTKL
Sb020266_Sorbi1 RGAREQLQRRNE--ELKARILGHDARQQCVKVQFEVDEPASAIDSMIGALRRLKGMDVRA
                :  :::* ** :  * *:   ***  .: .**:.::.** *.:***: **: **.*..: 

AT5G43650.1     KTVHANFSPQEFSATMTIETQIRGEEVEKRVERRL-QETEWKL--------------LFL
Sb020266_Sorbi1 RGIRSNLSGRRLCTEMNVETTIAAGEVEKAVEEALMQEVERKQQQQLGAGSAAAAPGFAG
                : :::*:* :.:.: *.:** * . **** **. * **.* *               :  

AT5G43650.1     PEASFYKDY--
Sb020266_Sorbi1 PQASSHVQNVF
                *:** : :
BoxShade v3.31 C (beta, 970507) Output
AT5G43650.1     - - M D N F F L G L S C Q E E N N F W D L I V - - - - - - - - - - - - - - - - A D I S G D R S V S V P I R S A F R S Y M
Sb020266_Sorbi1    M Q M D S Y N Y A S F F H D E A A F Y P H V A V P P S S P E L P F G L I A S P G E M E P E P P F A P P M P T A F Q D Y D
 
AT5G43650.1     K D T E L R M M S P K I S S S K V N V K K R M V N L L R K N W E - - - - - - - - - - - E K K N T V A P E K E R S R - - -
Sb020266_Sorbi1    Y P G A A V G V G A G A P F G G P S V H R Q V M D A L G G D G Q R E Q S M A M A E D G E E E Q E Q E P R R Q R Q R Q Q P
 
AT5G43650.1     - - - - - - - - - - - - - - R H M L K E R T R R E K Q K Q S Y L A L H S L L P F A T K N D K N S I V E K A V D E I A K L
Sb020266_Sorbi1    A G A A A A A V E S S R G F R H M M R E R Q R R E K L S Q S Y A D L H A L V A S R S R G D K N S I V Q A A A I Y I H E L
 
AT5G43650.1     Q R L K K E L V R R I K V I E E K S A K D G H D E M S E - T K V R V N L K E P L S G L D S M L E A L H Y L K S M G T K L
Sb020266_Sorbi1    R G A R E Q L Q R R N E - - E L K A R I L G H D A R Q Q C V K V Q F E V D E P A S A I D S M I G A L R R L K G M D V R A
 
AT5G43650.1     K T V H A N F S P Q E F S A T M T I E T Q I R G E E V E K R V E R R L - Q E T E W K L - - - - - - - - - - - - - - L F L
Sb020266_Sorbi1    R G I R S N L S G R R L C T E M N V E T T I A A G E V E K A V E E A L M Q E V E R K Q Q Q Q L G A G S A A A A P G F A G
 
AT5G43650.1     P E A S F Y K D Y - -
Sb020266_Sorbi1    P Q A S S H V Q N V F
 
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