fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002572 not found in 247aa AT5G43650.1 1st_1st 0.264770240 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43650.1     --MDNFF----LGLSCQEENNFWD--LIVADISGDRSVSVPIRSAFRSYMKDTELRMMSP
gm002572_Glyma0 MVMDRFFPEKILG------EIFWDEPFLATD-----------QSDLVQYSQINKAEASPP
                  **.**    **      : ***  ::.:*           :* : .* : .: .  .*

AT5G43650.1     KISSSKVNVKKRMVNLLRKNWE---EKKNTVAPEKERSRRHMLKERTRREKQKQSYLALH
gm002572_Glyma0 AATPSAFIMSKKMLAFLRKSWPWPVERNNVQENERNRSFRHMINERMRRQRQRQCCLALH
                  :.* . :.*:*: :***.*    *::*.   *::** ***::** **::*:*. ****

AT5G43650.1     SLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSAKDG--HDEMSETKVR-
gm002572_Glyma0 SILPQGTKTDNNSVIQMAAKEIVRLQGCREELQR--KNVELEANLEGVESSKGSGSKVQY
                *:** .**.*:**::: *..**.:**  ::** *  * :* ::  :*   .: * :**: 

AT5G43650.1     VNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIET-QIRGEEVEKRVE
gm002572_Glyma0 LRVPHPKSGIDSMVEILKCLKDKGVDTRSIKSTFSPQELFAVLETETDEVADADVESATW
                :.: .* **:***:* *: **. *.. :::::.*****: *.:  ** :: . :**. . 

AT5G43650.1     RRLQETEWKLLF-LPEASFYKDY---
gm002572_Glyma0 GTHDELDWKLHSDAREGSNKKQKTIH
                   :* :***     *.*  *:
BoxShade v3.31 C (beta, 970507) Output
AT5G43650.1     - - M D N F F - - - - L G L S C Q E E N N F W D - - L I V A D I S G D R S V S V P I R S A F R S Y M K D T E L R M M S P
gm002572_Glyma0    M V M D R F F P E K I L G - - - - - - E I F W D E P F L A T D - - - - - - - - - - - Q S D L V Q Y S Q I N K A E A S P P
 
AT5G43650.1     K I S S S K V N V K K R M V N L L R K N W E - - - E K K N T V A P E K E R S R R H M L K E R T R R E K Q K Q S Y L A L H
gm002572_Glyma0    A A T P S A F I M S K K M L A F L R K S W P W P V E R N N V Q E N E R N R S F R H M I N E R M R R Q R Q R Q C C L A L H
 
AT5G43650.1     S L L P F A T K N D K N S I V E K A V D E I A K L Q R L K K E L V R R I K V I E E K S A K D G - - H D E M S E T K V R -
gm002572_Glyma0    S I L P Q G T K T D N N S V I Q M A A K E I V R L Q G C R E E L Q R - - K N V E L E A N L E G V E S S K G S G S K V Q Y
 
AT5G43650.1     V N L K E P L S G L D S M L E A L H Y L K S M G T K L K T V H A N F S P Q E F S A T M T I E T - Q I R G E E V E K R V E
gm002572_Glyma0    L R V P H P K S G I D S M V E I L K C L K D K G V D T R S I K S T F S P Q E L F A V L E T E T D E V A D A D V E S A T W
 
AT5G43650.1     R R L Q E T E W K L L F - L P E A S F Y K D Y - - -
gm002572_Glyma0    G T H D E L D W K L H S D A R E G S N K K Q K T I H
 
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