fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43700.1 NLKATELRLGLPGTEE at 16/186 in AT5G43700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031862 not found in 461aa AT1G04240.1 1st_not 0.438642297 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43700.1     ---ME----------KVDVYDELVNLKATELRLGLPGTEE--------TVSCGKSNKRVL
Sb031862_Sorbi1 GEAMEVAAASAAASFGLKAADDVDNLRATELRLGLPGTEEEPQQVHKATAAAAAVELPLL
                   **           :.. *:: **:*************        *.:..  :  :*

AT5G43700.1     PEAT-----------EKEIESTGKTET---------ASPP--KAQIVGWPPVRSYRKNNV
Sb031862_Sorbi1 PAATTPPAPSTPRGKKRDVVGSGNEDAPKKRDGNADAAPPAAKAQVVGWPPVRSYRKSCF
                * **           :::: .:*: ::         *:**  ***:***********. .

AT5G43700.1     QTKKS---------------ESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENM
Sb031862_Sorbi1 QQQQQQAAAKSKPAPAAPAEEAPATGLFVKVSMDGAPYLRKVDLKMYKGYRELREALEAM
                * ::.               *: . * :*************:**.*** * ** ::** *

AT5G43700.1     FK-FS-VGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKG
Sb031862_Sorbi1 FLCFSGSGGSADAPAVNPSDFAVTYEDKDGDLMLVGDVPFDMFISTCKRLRIMKGSEARG
                *  **  *   :  . : ***. ******** *******::**:*:***********.:*

AT5G43700.1     LGCGGL-
Sb031862_Sorbi1 LGSVKNN
                **.
BoxShade v3.31 C (beta, 970507) Output
AT5G43700.1     - - - M E - - - - - - - - - - K V D V Y D E L V N L K A T E L R L G L P G T E E - - - - - - - - T V S C G K S N K R V L
Sb031862_Sorbi1    G E A M E V A A A S A A A S F G L K A A D D V D N L R A T E L R L G L P G T E E E P Q Q V H K A T A A A A A V E L P L L
 
AT5G43700.1     P E A T - - - - - - - - - - - E K E I E S T G K T E T - - - - - - - - - A S P P - - K A Q I V G W P P V R S Y R K N N V
Sb031862_Sorbi1    P A A T T P P A P S T P R G K K R D V V G S G N E D A P K K R D G N A D A A P P A A K A Q V V G W P P V R S Y R K S C F
 
AT5G43700.1     Q T K K S - - - - - - - - - - - - - - - E S E G Q G N Y V K V S M D G A P Y L R K I D L T M Y K Q Y P E L M K S L E N M
Sb031862_Sorbi1    Q Q Q Q Q Q A A A K S K P A P A A P A E E A P A T G L F V K V S M D G A P Y L R K V D L K M Y K G Y R E L R E A L E A M
 
AT5G43700.1     F K - F S - V G E Y F E R E G Y K G S D F V P T Y E D K D G D W M L V G D V P W E M F V S S C K R L R I M K G S E V K G
Sb031862_Sorbi1    F L C F S G S G G S A D A P A V N P S D F A V T Y E D K D G D L M L V G D V P F D M F I S T C K R L R I M K G S E A R G
 
AT5G43700.1     L G C G G L -
Sb031862_Sorbi1    L G S V K N N
 
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