fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43700.1 NLKATELRLGLPGTEE at 16/186 in AT5G43700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022746 not found in 372aa AT1G04240.1 not_not 0.433420365 III
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.420365535 III
YKNYKDLSLALEKMFS in 156/348
Sb031861 not found in 502aa AT3G04730.1 not_not 0.409921671 III
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_not 0.404699738 III
FEETIDLKLKLEQPAA in 37/369
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G43700.1     -------------------------------------------MEKVDVYDELVNLKATE
Sb033829_Sorbi1 -------------------------------MAPPQE------QDYIGLSPA--AAAATE
Sb022746_Sorbi1 -SPRLHPHLLLILILLSLSISRASKNAASSYLASKQAFSSDSFMEIVDAD----NLSATE
Sb031861_Sorbi1 ----LDEHLP---------------------------------RHVADEHPV--AVLVLV
Sb020598_Sorbi1 GGPRVRG----------------------------------------DRAPA--RPARRQ
                                                               .            

AT5G43700.1     LRLGLPGTEET--------------------VSCGKS----------------------N
Sb033829_Sorbi1 LRLGLPGTEEA--------------------DGGEAAAGTPLT--------LELLPKGGA
Sb022746_Sorbi1 LRLGLPGTSSS--------------------DDWQKKPS----------------PSVGA
Sb031861_Sorbi1 GRHVLGAVEQI-----HQLALVHAVHPLRPTASNGEGA-------------EHLLERLGQ
Sb020598_Sorbi1 RRRGCRGGEEAGFRGDH-----------RPQAEAGAAGGAALGEGGGGWRWRRRRPRRGP
                 *    . ..                                                  

AT5G43700.1     KRVLPEA-----TEKEIESTGKTETAS------------PPKAQ----------------
Sb033829_Sorbi1 KRGFTDA----IVRREAAARGK-APAEDEEVDKKKTQAPAAKAQ----------------
Sb022746_Sorbi1 KRALDD------TRSEASGTSSPATAADLDLDHDHDAAPPPKAQ----------------
Sb031861_Sorbi1 LLVALVHLEVHLAQVRRAVQAH--------LHERRTTASCRRRR---GLVGVFAAAGALV
Sb020598_Sorbi1 TVVASS------SQHRRRRYGHEEVAEPEQRGHRRRAAGPRKASRPQGTGG---------
                             . .    .                    :                  

AT5G43700.1     ------IV-----GWPPVRSYRKNNVQT---------KKSES-------EGQG-------
Sb033829_Sorbi1 ------VV-----GWPPIRSYRKNTMAM-----NQPTLKTKD-------DGEAKQALV--
Sb022746_Sorbi1 ------VV-----GWPPVRAYRKNTFQAAAAAAKKADQQQQQ-------QGGG-------
Sb031861_Sorbi1 GLHGHDVLPERPDRWP----------------SHHLSLGGARLLGGVSLHGGGGDDAALA
Sb020598_Sorbi1 GLAARPVVPQEHPGRPIPEKWRRRQGQR------RQDVTGVR-------EGEHGRRAVPA
                      ::       *                                 .*         

AT5G43700.1     -------NYVKVSMDGAPYLRKIDLTMYKQYPEL----------------------MKSL
Sb033829_Sorbi1 ----QDCLYVKVSMDGAPYLRKVDLKMYKNYKDL----------------------SLAL
Sb022746_Sorbi1 -------LYVKVSMDGAPYLRKVDLRMYKGYREL----------------------REAL
Sb031861_Sorbi1 RGP----LHLPA--DGGL-------------------LRGGHAAGVFLGGGNTVLMLVRL
Sb020598_Sorbi1 QGGPEDVRELPGAVQGAP--EDVQLLHHRQLRAAGDDERGDEAAGG---------PSERL
                         :    :*.                                          *

AT5G43700.1     ENMFK-FSVG--EYFEREGYKG------------------SD-------FVPTYEDKDGD
Sb033829_Sorbi1 EKMFSCFTVGHSESNGKSGREGL-------SDCR-----LMDHKN-GTELVLTYKDKDGD
Sb022746_Sorbi1 DALFT-KS------FSAAAAEG------------------GDH-----QHAIAYEDKDGD
Sb031861_Sorbi1 RRLQ--YGRGSRRLQLQLEVDGLCEAPLPGGDDR--APPFADH------LSPAAGQAQTE
Sb020598_Sorbi1 RRLLA-HVRGQGRRLDARRRRPL-------GDVRGVVQAPPDHERIGSRRPRTQGDGQVQ
                  :                                      *          :  : : :

AT5G43700.1     WMLVG----------DVPWEMFVSSCKRLRIMKGSEVKGL----------GC------GG
Sb033829_Sorbi1 WMLVG----------DVPWRMFTGSCRRLRIMKGSDAVGLAPRVSDKSKNG---------
Sb022746_Sorbi1 LMLVG----------DVPWDMFISSCKKLRIMKGSEAR----------------------
Sb031861_Sorbi1 LRLLEPQVRRRHCCCRRHWPSSSPLGSRLLLLPCFCFVCFALLASQDEEAGWLCKCKGGG
Sb020598_Sorbi1 QQLLS----------KAYYCGNASVSSRYQLTATVDNVLLLLLLHSVS------------
                  *:              :        :  :                             

AT5G43700.1     L-------------
Sb033829_Sorbi1 --------------
Sb022746_Sorbi1 --------------
Sb031861_Sorbi1 FANARGLGRGATTT
Sb020598_Sorbi1 --------------
BoxShade v3.31 C (beta, 970507) Output
AT5G43700.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E K V D V Y D E L V N L K A T E
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A P P Q E - - - - - - Q D Y I G L S P A - - A A A A T E
Sb022746_Sorbi1    - S P R L H P H L L L I L I L L S L S I S R A S K N A A S S Y L A S K Q A F S S D S F M E I V D A D - - - - N L S A T E
Sb031861_Sorbi1    - - - - L D E H L P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H V A D E H P V - - A V L V L V
Sb020598_Sorbi1    G G P R V R G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D R A P A - - R P A R R Q
 
AT5G43700.1     L R L G L P G T E E T - - - - - - - - - - - - - - - - - - - - V S C G K S - - - - - - - - - - - - - - - - - - - - - - N
Sb033829_Sorbi1    L R L G L P G T E E A - - - - - - - - - - - - - - - - - - - - D G G E A A A G T P L T - - - - - - - - L E L L P K G G A
Sb022746_Sorbi1    L R L G L P G T S S S - - - - - - - - - - - - - - - - - - - - D D W Q K K P S - - - - - - - - - - - - - - - - P S V G A
Sb031861_Sorbi1    G R H V L G A V E Q I - - - - - H Q L A L V H A V H P L R P T A S N G E G A - - - - - - - - - - - - - E H L L E R L G Q
Sb020598_Sorbi1    R R R G C R G G E E A G F R G D H - - - - - - - - - - - R P Q A E A G A A G G A A L G E G G G G W R W R R R R P R R G P
 
AT5G43700.1     K R V L P E A - - - - - T E K E I E S T G K T E T A S - - - - - - - - - - - - P P K A Q - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    K R G F T D A - - - - I V R R E A A A R G K - A P A E D E E V D K K K T Q A P A A K A Q - - - - - - - - - - - - - - - -
Sb022746_Sorbi1    K R A L D D - - - - - - T R S E A S G T S S P A T A A D L D L D H D H D A A P P P K A Q - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    L L V A L V H L E V H L A Q V R R A V Q A H - - - - - - - - L H E R R T T A S C R R R R - - - G L V G V F A A A G A L V
Sb020598_Sorbi1    T V V A S S - - - - - - S Q H R R R R Y G H E E V A E P E Q R G H R R R A A G P R K A S R P Q G T G G - - - - - - - - -
 
AT5G43700.1     - - - - - - I V - - - - - G W P P V R S Y R K N N V Q T - - - - - - - - - K K S E S - - - - - - - E G Q G - - - - - - -
Sb033829_Sorbi1    - - - - - - V V - - - - - G W P P I R S Y R K N T M A M - - - - - N Q P T L K T K D - - - - - - - D G E A K Q A L V - -
Sb022746_Sorbi1    - - - - - - V V - - - - - G W P P V R A Y R K N T F Q A A A A A A K K A D Q Q Q Q Q - - - - - - - Q G G G - - - - - - -
Sb031861_Sorbi1    G L H G H D V L P E R P D R W P - - - - - - - - - - - - - - - - S H H L S L G G A R L L G G V S L H G G G G D D A A L A
Sb020598_Sorbi1    G L A A R P V V P Q E H P G R P I P E K W R R R Q G Q R - - - - - - R Q D V T G V R - - - - - - - E G E H G R R A V P A
 
AT5G43700.1     - - - - - - - N Y V K V S M D G A P Y L R K I D L T M Y K Q Y P E L - - - - - - - - - - - - - - - - - - - - - - M K S L
Sb033829_Sorbi1    - - - - Q D C L Y V K V S M D G A P Y L R K V D L K M Y K N Y K D L - - - - - - - - - - - - - - - - - - - - - - S L A L
Sb022746_Sorbi1    - - - - - - - L Y V K V S M D G A P Y L R K V D L R M Y K G Y R E L - - - - - - - - - - - - - - - - - - - - - - R E A L
Sb031861_Sorbi1    R G P - - - - L H L P A - - D G G L - - - - - - - - - - - - - - - - - - - L R G G H A A G V F L G G G N T V L M L V R L
Sb020598_Sorbi1    Q G G P E D V R E L P G A V Q G A P - - E D V Q L L H H R Q L R A A G D D E R G D E A A G G - - - - - - - - - P S E R L
 
AT5G43700.1     E N M F K - F S V G - - E Y F E R E G Y K G - - - - - - - - - - - - - - - - - - S D - - - - - - - F V P T Y E D K D G D
Sb033829_Sorbi1    E K M F S C F T V G H S E S N G K S G R E G L - - - - - - - S D C R - - - - - L M D H K N - G T E L V L T Y K D K D G D
Sb022746_Sorbi1    D A L F T - K S - - - - - - F S A A A A E G - - - - - - - - - - - - - - - - - - G D H - - - - - Q H A I A Y E D K D G D
Sb031861_Sorbi1    R R L Q - - Y G R G S R R L Q L Q L E V D G L C E A P L P G G D D R - - A P P F A D H - - - - - - L S P A A G Q A Q T E
Sb020598_Sorbi1    R R L L A - H V R G Q G R R L D A R R R R P L - - - - - - - G D V R G V V Q A P P D H E R I G S R R P R T Q G D G Q V Q
 
AT5G43700.1     W M L V G - - - - - - - - - - D V P W E M F V S S C K R L R I M K G S E V K G L - - - - - - - - - - G C - - - - - - G G
Sb033829_Sorbi1    W M L V G - - - - - - - - - - D V P W R M F T G S C R R L R I M K G S D A V G L A P R V S D K S K N G - - - - - - - - -
Sb022746_Sorbi1    L M L V G - - - - - - - - - - D V P W D M F I S S C K K L R I M K G S E A R - - - - - - - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    L R L L E P Q V R R R H C C C R R H W P S S S P L G S R L L L L P C F C F V C F A L L A S Q D E E A G W L C K C K G G G
Sb020598_Sorbi1    Q Q L L S - - - - - - - - - - K A Y Y C G N A S V S S R Y Q L T A T V D N V L L L L L L H S V S - - - - - - - - - - - -
 
AT5G43700.1     L - - - - - - - - - - - - -
Sb033829_Sorbi1    - - - - - - - - - - - - - -
Sb022746_Sorbi1    - - - - - - - - - - - - - -
Sb031861_Sorbi1    F A N A R G L G R G A T T T
Sb020598_Sorbi1    - - - - - - - - - - - - - -
 
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