fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43700.1 NLKATELRLGLPGTEE at 16/186 in AT5G43700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055370 NLKATELRLGLPGTEE in 18/194 AT5G43700.1 not_1st 0.639686684 II
Gm052264 NLKATELRLGLPGCDE in 14/204 AT5G43700.1 not_1st 0.587467362 II
Gm007180 NLKATELRLGLPGCDE in 15/206 AT5G43700.1 not_1st 0.584856396 II
Gm052265 NLKATELRLGLPGCDE in 14/181 AT5G43700.1 not_1st 0.485639686 II
Gm026656 NLEATELRLGLPGSDE in 14/215 AT5G43700.1 not_1st 0.472584856 II
Gm052266 NLKATELRLGLPGCDE in 14/177 AT5G43700.1 not_1st 0.462140992 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G43700.1     MEKVDV-YDELV-NLKATELRLGLPGTEE----TVSCGK----SNKRVLPEATEKE----
gm052264_Glyma1 MGS----FETEL-NLKATELRLGLPGCDETHDKSSSSSGSVVRSNKRSSPEPSVEE----
gm052266_Glyma1 MGS----FETEL-NLKATELRLGLPGCDETHDKSSSSSGSVVRSNKRSSPEPSVEE----
gm052265_Glyma1 MGS----FETEL-NLKATELRLGLPGCDETHDKSSSSSGSVVRSNKRSSPEPSVEE----
gm026656_Glyma1 MGK----YEKEL-NLEATELRLGLPGSDEPGKR------SIVRSNKRSSTEASEEECISK
gm007180_Glyma0 MGS----FETELMNLKATELRLGLPGCDETNEKSSSSSGSVVRSNKRSSPEPSVEE----
gm055370_Glyma2 MENTTVTYQTDL-NLKATELRLGLPGTEESEEKTLSAGARI--NNKRPLTE-TSDE----
                * .    ::  : **:********** :*              .***  .* : .*    

AT5G43700.1     --IESTG----------KTETASPPKAQIVGWPPVRSYRKNNVQTKKS----ESEGQGNY
gm052264_Glyma1 SRCNSNGSSDSTTTSDHDEDSVQPAKVQVVGWPPIRSFRKNSLQQQKKVEQ-QGDGSGTY
gm052266_Glyma1 SRCNSNGSSDSTTTSDHDEDSVQPAKVQVVGWPPIRSFRKNSLQQQKKVEQ-QGDGSGTY
gm052265_Glyma1 SRCNSNGSSDSTTTSDHDEDSVQPAKVQVVGWPPIRSFRKNSLQQQKKVEQ-QGDGSGTY
gm026656_Glyma1 GNMNSNGSD---ITSDDQDNLVPPAKAQVVGWPPVRSYRKNTLQQKK--EE-QGEGSGMY
gm007180_Glyma0 SRCNSNGSSDSTTTSDHDQDSAQPEKVQVVGWPPIRSFRKNSLQQQKKVEQLQGDGGGMY
gm055370_Glyma2 --CASNGTS---SAPHEKTETAPPAKTKIVGWPPIRSYRKNSLQ--------ESEGAGIY
                    *.*          . : . * *.::*****:**:***.:*        :.:* * *

AT5G43700.1     VKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVG----------------------
gm052264_Glyma1 LKVSMAGAPYLRKIDLKVYNSYPELLMALQNLFKCTFG----------------------
gm052266_Glyma1 LKVSMAGAPYLRKIDLKVYNSYPELLMALQNLFKCTF-----------------------
gm052265_Glyma1 LKVSMAGAPYLRKIDLKVYNSYPELLMALQNLFKCTFG----------------------
gm026656_Glyma1 VKVSMAGAPYLRKIDLNVYKSYPELLKALGNMFKCTFGKNLEQVLNNLLLFFLAFLRLIW
gm007180_Glyma0 VKVSMAGAPYLRKIDLKVYNSYPELLAALQSLFTCTFG----------------------
gm055370_Glyma2 VKVSMDGAPYLRKIDLKVYGGYTQLLKSLENMFKLTIG----------------------
                :**** **********.:*  *.:*: :* .:*. :.                       

AT5G43700.1     -------------------EYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKR
gm052264_Glyma1 -------------------EYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKR
gm052266_Glyma1 ----------------------EREGYNGSEYAPTYEDKDGDWMLVGDVPWK--------
gm052265_Glyma1 -------------------EYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWK--------
gm026656_Glyma1 HIYVYVERRNKVVIACDPGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWK--------
gm007180_Glyma0 -------------------EYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKR
gm055370_Glyma2 -------------------EHSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCRR
                                      *:***:**::.******************.        

AT5G43700.1     LRIMKGSEVKGLGCGGL
gm052264_Glyma1 LKIIKGSEAKGLGCL--
gm052266_Glyma1 -----------------
gm052265_Glyma1 -----------------
gm026656_Glyma1 -----------------
gm007180_Glyma0 LKIIKGSEAKGLGCL--
gm055370_Glyma2 LRIMKGSEARGLGCAV-
BoxShade v3.31 C (beta, 970507) Output
AT5G43700.1     M E K V D V - Y D E L V - N L K A T E L R L G L P G T E E - - - - T V S C G K - - - - S N K R V L P E A T E K E - - - -
gm052264_Glyma1    M G S - - - - F E T E L - N L K A T E L R L G L P G C D E T H D K S S S S S G S V V R S N K R S S P E P S V E E - - - -
gm052266_Glyma1    M G S - - - - F E T E L - N L K A T E L R L G L P G C D E T H D K S S S S S G S V V R S N K R S S P E P S V E E - - - -
gm052265_Glyma1    M G S - - - - F E T E L - N L K A T E L R L G L P G C D E T H D K S S S S S G S V V R S N K R S S P E P S V E E - - - -
gm026656_Glyma1    M G K - - - - Y E K E L - N L E A T E L R L G L P G S D E P G K R - - - - - - S I V R S N K R S S T E A S E E E C I S K
gm007180_Glyma0    M G S - - - - F E T E L M N L K A T E L R L G L P G C D E T N E K S S S S S G S V V R S N K R S S P E P S V E E - - - -
gm055370_Glyma2    M E N T T V T Y Q T D L - N L K A T E L R L G L P G T E E S E E K T L S A G A R I - - N N K R P L T E - T S D E - - - -
 
AT5G43700.1     - - I E S T G - - - - - - - - - - K T E T A S P P K A Q I V G W P P V R S Y R K N N V Q T K K S - - - - E S E G Q G N Y
gm052264_Glyma1    S R C N S N G S S D S T T T S D H D E D S V Q P A K V Q V V G W P P I R S F R K N S L Q Q Q K K V E Q - Q G D G S G T Y
gm052266_Glyma1    S R C N S N G S S D S T T T S D H D E D S V Q P A K V Q V V G W P P I R S F R K N S L Q Q Q K K V E Q - Q G D G S G T Y
gm052265_Glyma1    S R C N S N G S S D S T T T S D H D E D S V Q P A K V Q V V G W P P I R S F R K N S L Q Q Q K K V E Q - Q G D G S G T Y
gm026656_Glyma1    G N M N S N G S D - - - I T S D D Q D N L V P P A K A Q V V G W P P V R S Y R K N T L Q Q K K - - E E - Q G E G S G M Y
gm007180_Glyma0    S R C N S N G S S D S T T T S D H D Q D S A Q P E K V Q V V G W P P I R S F R K N S L Q Q Q K K V E Q L Q G D G G G M Y
gm055370_Glyma2    - - C A S N G T S - - - S A P H E K T E T A P P A K T K I V G W P P I R S Y R K N S L Q - - - - - - - - E S E G A G I Y
 
AT5G43700.1     V K V S M D G A P Y L R K I D L T M Y K Q Y P E L M K S L E N M F K F S V G - - - - - - - - - - - - - - - - - - - - - -
gm052264_Glyma1    L K V S M A G A P Y L R K I D L K V Y N S Y P E L L M A L Q N L F K C T F G - - - - - - - - - - - - - - - - - - - - - -
gm052266_Glyma1    L K V S M A G A P Y L R K I D L K V Y N S Y P E L L M A L Q N L F K C T F - - - - - - - - - - - - - - - - - - - - - - -
gm052265_Glyma1    L K V S M A G A P Y L R K I D L K V Y N S Y P E L L M A L Q N L F K C T F G - - - - - - - - - - - - - - - - - - - - - -
gm026656_Glyma1    V K V S M A G A P Y L R K I D L N V Y K S Y P E L L K A L G N M F K C T F G K N L E Q V L N N L L L F F L A F L R L I W
gm007180_Glyma0    V K V S M A G A P Y L R K I D L K V Y N S Y P E L L A A L Q S L F T C T F G - - - - - - - - - - - - - - - - - - - - - -
gm055370_Glyma2    V K V S M D G A P Y L R K I D L K V Y G G Y T Q L L K S L E N M F K L T I G - - - - - - - - - - - - - - - - - - - - - -
 
AT5G43700.1     - - - - - - - - - - - - - - - - - - - E Y F E R E G Y K G S D F V P T Y E D K D G D W M L V G D V P W E M F V S S C K R
gm052264_Glyma1    - - - - - - - - - - - - - - - - - - - E Y S E R E G Y N G S E Y A P T Y E D K D G D W M L V G D V P W N M F V S S C K R
gm052266_Glyma1    - - - - - - - - - - - - - - - - - - - - - - E R E G Y N G S E Y A P T Y E D K D G D W M L V G D V P W K - - - - - - - -
gm052265_Glyma1    - - - - - - - - - - - - - - - - - - - E Y S E R E G Y N G S E Y A P T Y E D K D G D W M L V G D V P W K - - - - - - - -
gm026656_Glyma1    H I Y V Y V E R R N K V V I A C D P G E Y S E R E G Y N G S E Y A P T Y E D K D G D W M L V G D V P W K - - - - - - - -
gm007180_Glyma0    - - - - - - - - - - - - - - - - - - - E Y S E R E G Y N G S E Y A P T Y E D K D G D W M L V G D V P W N M F V S S C K R
gm055370_Glyma2    - - - - - - - - - - - - - - - - - - - E H S E K E G Y K G S D Y A P T Y E D K D G D W M L V G D V P W D M F V T S C R R
 
AT5G43700.1     L R I M K G S E V K G L G C G G L
gm052264_Glyma1    L K I I K G S E A K G L G C L - -
gm052266_Glyma1    - - - - - - - - - - - - - - - - -
gm052265_Glyma1    - - - - - - - - - - - - - - - - -
gm026656_Glyma1    - - - - - - - - - - - - - - - - -
gm007180_Glyma0    L K I I K G S E A K G L G C L - -
gm055370_Glyma2    L R I M K G S E A R G L G C A V -
 
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