fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028719 EFEVPDLDLALNLDEE in 379/448 AT3G22830.1 1st_not 0.404513888 II
Pt041415 not found in 348aa AT3G22830.1 1st_not 0.425347222 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G43840.1     ------------------------------------------------------------
gm028719_Glyma1 MTPNNISPKKKKQKGKRTLASTTTIYIIYKTHVANASGSSTSLYSKSFLPHHHTITLYNK
pt041415_POPTR_ ------------------MASTA-------------------------------------
                                                                            

AT5G43840.1     -----------------------------------MDYN------------LPIPLEGLK
gm028719_Glyma1 STFTAPPSSLSPFYSKFFKSYLRLNQTLNANISLKRDLNLDSLGYQKPIMVVPQPIEGLH
pt041415_POPTR_ ---------------------------------------------------IPQPMEGLR
                                                                   :* *:***:

AT5G43840.1     ETPPTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVR
gm028719_Glyma1 ETGPPPFLTKTYDIVDDPSTNHIVSWSTGNNSFVVWDPQAFSVTLLPKFFKHNNFSSFVR
pt041415_POPTR_ DSVPPPFLTKTYDIIEDASTNHIVSWSRGNNSFIIWDPQAFSTSLLPRYFKHNNFSSFVR
                :: *..******:*::*.***:***** .****::*:*::*:   **: ***********

AT5G43840.1     QLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQS--------------
gm028719_Glyma1 QLNTYGFKKVDPDKWEFANEMFLRGQRILLKNIRRRKANHHQSHQHAMQQGVEEPFVEVG
pt041415_POPTR_ QLNTYGFRKVDPDRWEFANEGFLRGKKHLLKSIRRRKAPQTLTSQAC---------VEVG
                *******:*:*.::****** **:*:: ***.*:***:      *               

AT5G43840.1     ---LEGEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKK
gm028719_Glyma1 QFELDGEIDRLRRDRQVLMVELVKLRQQQQSTKSHLQEMEGRIKMTEQKQKQMMNFLARA
pt041415_POPTR_ TFGLDGEVNRLRRDKQVLMVELVKLRQQQQTTKACIQLIERKLKRTENKQQQMMSFLARA
                   *:**:..****: .* ****:**::*::.*: :: :* ::* ** **: **.** : 

AT5G43840.1     IKKPSFLQSLRKRNLQGIKNREQKQEVISS----------------------HG-VEDNG
gm028719_Glyma1 MQNPNFVQQLAQQK----EWRKELEEVFSNKKRRPIDQGPNVVEVADDDDELLGCAEECS
pt041415_POPTR_ MQNPNFVQQLAQQK----EMRKELEEAISKKRRRPIDQGRSNFEVAE-----FGHGEGVG
                :::*.*:*.* :::    : *:: :*.:*.                       *  *  .

AT5G43840.1     KFVKAEPEE-YGD--DIDDQCGGVFDYGD--------------------ELHIASM----
gm028719_Glyma1 DFVKLEPQEYYSD----DKVLE--FEVPDL------------DLALNLDEENIESQKRIM
pt041415_POPTR_ TFVKIEHQE-FGDLSEFDDLSE--FDVPEFHNPAMNMQGLSENQLINLVEERIEKG----
                 *** * :* :.*    *.     *:  :                    * .* .     

AT5G43840.1     -EHQGQGEDEIE--MDSEGIWKG-----------FVLSE-----EEMCDLVEHFI-----
gm028719_Glyma1 EEEHVQLENSRERYID-EVFWQDLLNEGIEDQ--GVLGV-----EDVDVLAKQLGYLA--
pt041415_POPTR_ -EEHGNKGNE----ID-EGFWEDLLNEDIIDEEIAVLGSEGEDEEDVSVLVEQLGYLGSS
                 *.: :  :.    :* * :*:.            **.      *::  *.:::      

AT5G43840.1     -----
gm028719_Glyma1 -----
pt041415_POPTR_ TELRT
BoxShade v3.31 C (beta, 970507) Output
AT5G43840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm028719_Glyma1    M T P N N I S P K K K K Q K G K R T L A S T T T I Y I I Y K T H V A N A S G S S T S L Y S K S F L P H H H T I T L Y N K
pt041415_POPTR_    - - - - - - - - - - - - - - - - - - M A S T A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G43840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Y N - - - - - - - - - - - - L P I P L E G L K
gm028719_Glyma1    S T F T A P P S S L S P F Y S K F F K S Y L R L N Q T L N A N I S L K R D L N L D S L G Y Q K P I M V V P Q P I E G L H
pt041415_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I P Q P M E G L R
 
AT5G43840.1     E T P P T A F L T K T Y N I V E D S S T N N I V S W S R D N N S F I V W E P E T F A L I C L P R C F K H N N F S S F V R
gm028719_Glyma1    E T G P P P F L T K T Y D I V D D P S T N H I V S W S T G N N S F V V W D P Q A F S V T L L P K F F K H N N F S S F V R
pt041415_POPTR_    D S V P P P F L T K T Y D I I E D A S T N H I V S W S R G N N S F I I W D P Q A F S T S L L P R Y F K H N N F S S F V R
 
AT5G43840.1     Q L N T Y G F K K I D T E R W E F A N E H F L K G E R H L L K N I K R R K T S S Q T Q T Q S - - - - - - - - - - - - - -
gm028719_Glyma1    Q L N T Y G F K K V D P D K W E F A N E M F L R G Q R I L L K N I R R R K A N H H Q S H Q H A M Q Q G V E E P F V E V G
pt041415_POPTR_    Q L N T Y G F R K V D P D R W E F A N E G F L R G K K H L L K S I R R R K A P Q T L T S Q A C - - - - - - - - - V E V G
 
AT5G43840.1     - - - L E G E I H E L R R D R M A L E V E L V R L R R K Q E S V K T Y L H L M E E K L K V T E V K Q E M M M N F L L K K
gm028719_Glyma1    Q F E L D G E I D R L R R D R Q V L M V E L V K L R Q Q Q Q S T K S H L Q E M E G R I K M T E Q K Q K Q M M N F L A R A
pt041415_POPTR_    T F G L D G E V N R L R R D K Q V L M V E L V K L R Q Q Q Q T T K A C I Q L I E R K L K R T E N K Q Q Q M M S F L A R A
 
AT5G43840.1     I K K P S F L Q S L R K R N L Q G I K N R E Q K Q E V I S S - - - - - - - - - - - - - - - - - - - - - - H G - V E D N G
gm028719_Glyma1    M Q N P N F V Q Q L A Q Q K - - - - E W R K E L E E V F S N K K R R P I D Q G P N V V E V A D D D D E L L G C A E E C S
pt041415_POPTR_    M Q N P N F V Q Q L A Q Q K - - - - E M R K E L E E A I S K K R R R P I D Q G R S N F E V A E - - - - - F G H G E G V G
 
AT5G43840.1     K F V K A E P E E - Y G D - - D I D D Q C G G V F D Y G D - - - - - - - - - - - - - - - - - - - - E L H I A S M - - - -
gm028719_Glyma1    D F V K L E P Q E Y Y S D - - - - D K V L E - - F E V P D L - - - - - - - - - - - - D L A L N L D E E N I E S Q K R I M
pt041415_POPTR_    T F V K I E H Q E - F G D L S E F D D L S E - - F D V P E F H N P A M N M Q G L S E N Q L I N L V E E R I E K G - - - -
 
AT5G43840.1     - E H Q G Q G E D E I E - - M D S E G I W K G - - - - - - - - - - - F V L S E - - - - - E E M C D L V E H F I - - - - -
gm028719_Glyma1    E E E H V Q L E N S R E R Y I D - E V F W Q D L L N E G I E D Q - - G V L G V - - - - - E D V D V L A K Q L G Y L A - -
pt041415_POPTR_    - E E H G N K G N E - - - - I D - E G F W E D L L N E D I I D E E I A V L G S E G E D E E D V S V L V E Q L G Y L G S S
 
AT5G43840.1     - - - - -
gm028719_Glyma1    - - - - -
pt041415_POPTR_    T E L R T
 
0