fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041415 not found in 348aa AT3G22830.1 1st_not 0.425347222 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43840.1     -MDYNLPIPLEGLKETPPTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICL
pt041415_POPTR_ MASTAIPQPMEGLRDSVPPPFLTKTYDIIEDASTNHIVSWSRGNNSFIIWDPQAFSTSLL
                  .  :* *:***::: *..******:*:**:***:******.*****:*:*::*:   *

AT5G43840.1     PRCFKHNNFSSFVRQLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQS
pt041415_POPTR_ PRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGKKHLLKSIRRRKAPQTLTSQA
                ** ******************:*:*.:******* **:*::****.*:***:..   :*:

AT5G43840.1     --------LEGEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMN
pt041415_POPTR_ CVEVGTFGLDGEVNRLRRDKQVLMVELVKLRQQQQTTKACIQLIERKLKRTENKQQQMMS
                        *:**::.****: .* ****:**::*::.*: ::*:*.*** ** **: **.

AT5G43840.1     FLLKKIKKPSFLQSLRKRNLQGIKNREQKQEVISS-------------------HGVEDN
pt041415_POPTR_ FLARAMQNPNFVQQLAQQK----EMRKELEEAISKKRRRPIDQGRSNFEVAEFGHG-EGV
                ** : :::*.*:*.* :::    : *:: :*.**.                   ** *. 

AT5G43840.1     GKFVKAEPEEYGD--DIDDQCGGVFDYGDELHIASMEHQGQGEDEI--------------
pt041415_POPTR_ GTFVKIEHQEFGDLSEFDDL--SEFDV-PEFHNPAMNMQGLSENQLINLVEERIEKGEEH
                *.*** * :*:**  ::**   . **   *:* .:*: ** .*:::              

AT5G43840.1     -----EMDSEGIWKGF-----------VL-----SEEEMCDLVEHFI----------
pt041415_POPTR_ GNKGNEID-EGFWEDLLNEDIIDEEIAVLGSEGEDEEDVSVLVEQLGYLGSSTELRT
                     *:* **:*:.:           **     .**::. ***::
BoxShade v3.31 C (beta, 970507) Output
AT5G43840.1     - M D Y N L P I P L E G L K E T P P T A F L T K T Y N I V E D S S T N N I V S W S R D N N S F I V W E P E T F A L I C L
pt041415_POPTR_    M A S T A I P Q P M E G L R D S V P P P F L T K T Y D I I E D A S T N H I V S W S R G N N S F I I W D P Q A F S T S L L
 
AT5G43840.1     P R C F K H N N F S S F V R Q L N T Y G F K K I D T E R W E F A N E H F L K G E R H L L K N I K R R K T S S Q T Q T Q S
pt041415_POPTR_    P R Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E G F L R G K K H L L K S I R R R K A P Q T L T S Q A
 
AT5G43840.1     - - - - - - - - L E G E I H E L R R D R M A L E V E L V R L R R K Q E S V K T Y L H L M E E K L K V T E V K Q E M M M N
pt041415_POPTR_    C V E V G T F G L D G E V N R L R R D K Q V L M V E L V K L R Q Q Q Q T T K A C I Q L I E R K L K R T E N K Q Q Q M M S
 
AT5G43840.1     F L L K K I K K P S F L Q S L R K R N L Q G I K N R E Q K Q E V I S S - - - - - - - - - - - - - - - - - - - H G V E D N
pt041415_POPTR_    F L A R A M Q N P N F V Q Q L A Q Q K - - - - E M R K E L E E A I S K K R R R P I D Q G R S N F E V A E F G H G - E G V
 
AT5G43840.1     G K F V K A E P E E Y G D - - D I D D Q C G G V F D Y G D E L H I A S M E H Q G Q G E D E I - - - - - - - - - - - - - -
pt041415_POPTR_    G T F V K I E H Q E F G D L S E F D D L - - S E F D V - P E F H N P A M N M Q G L S E N Q L I N L V E E R I E K G E E H
 
AT5G43840.1     - - - - - E M D S E G I W K G F - - - - - - - - - - - V L - - - - - S E E E M C D L V E H F I - - - - - - - - - -
pt041415_POPTR_    G N K G N E I D - E G F W E D L L N E D I I D E E I A V L G S E G E D E E D V S V L V E Q L G Y L G S S T E L R T
 
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