fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041415 not found in 348aa AT3G22830.1 1st_not 0.425347222 II
Pt035084 not found in 358aa AT3G22830.1 not_not 0.402777777 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G43840.1     ------------------------MDYNLPIPLEGLKETPPTAFLTKTYNIVEDSSTNNI
pt035084_POPTR_ MNRRGRAIKEEYAGGSSSTYSSGMASTAIPQPMEGLHDPGPPPFLTKTYDIIEDSSTNHI
pt041415_POPTR_ -----------------------MASTAIPQPMEGLRDSVPPPFLTKTYDIIEDASTNHI
                                         .  :* *:***::. *..******:*:**:***:*

AT5G43840.1     VSWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVRQLNTYGFKKIDTERWEFANEHFL
pt035084_POPTR_ ISWSRGNNSFVVWDPQAFSISLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFL
pt041415_POPTR_ VSWSRGNNSFIIWDPQAFSTSLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFL
                :****.****::*:*::*:   *** ******************:*:*.:******* **

AT5G43840.1     KGERHLLKNIKRRKTSSQTQTQS-------------LEGEIHELRRDRMALEVELVRLRR
pt035084_POPTR_ RGKKHLLKTVRRRK-APQTQTSQQALEACVEVGTFRLDGEVDRLSRDKQVLMVELVKLRQ
pt041415_POPTR_ RGKKHLLKSIRRRK-APQTLTSQ----ACVEVGTFGLDGEVNRLRRDKQVLMVELVKLRQ
                :*::****.::*** :.** *..             *:**:..* **: .* ****:**:

AT5G43840.1     KQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKKIKKPSFLQSL-----------------
pt035084_POPTR_ QQQTTRACLQLMEQRVKRNENKQQHMMSFLARAMQNPTFVQQLVQQKDMMKELEEEISKK
pt041415_POPTR_ QQQTTKACIQLIERKLKRTENKQQQMMSFLARAMQNPNFVQQLAQQKEMRKELEEAISKK
                :*::.:: ::*:*.::* .* **: **.** : :::*.*:*.*                 

AT5G43840.1     RKRNL-QGIKNREQKQEVISSHGVEDNGKFVKAEPEEYG-----DDIDDQCGGVFDYGDE
pt035084_POPTR_ KRRPIDQGRNNVEVGE---FGHG-EGVGTFVKIEPREFG------GFSE-----FEV-PE
pt041415_POPTR_ RRRPIDQGRSNFEVAE---FGHG-EGVGTFVKIEHQEFGDLSEFDDLSE-----FDV-PE
                ::* : ** .* *  :    .** *. *.*** * .*:*      .:.:     *:   *

AT5G43840.1     LHIASMEHQGQGEDEI-------------------EMDSEGIWKGFV-------------
pt035084_POPTR_ FVNLAMNMQELNENQLINLDEECIEKGEEYENNGKDFD-EAFWEDLLNEDI--------G
pt041415_POPTR_ FHNPAMNMQGLSENQLINLVEERIEKGEEHGNKGNEID-EGFWEDLLNEDIIDEEIAVLG
                :   :*: *  .*:::                   ::* *.:*:.::             

AT5G43840.1     ---LSEEEMCDLVEHFI----------
pt035084_POPTR_ EQGEDEEDVNVLVEQLGYLGYSPK---
pt041415_POPTR_ SEGEDEEDVSVLVEQLGYLGSSTELRT
                    .**::  ***::
BoxShade v3.31 C (beta, 970507) Output
AT5G43840.1     - - - - - - - - - - - - - - - - - - - - - - - - M D Y N L P I P L E G L K E T P P T A F L T K T Y N I V E D S S T N N I
pt035084_POPTR_    M N R R G R A I K E E Y A G G S S S T Y S S G M A S T A I P Q P M E G L H D P G P P P F L T K T Y D I I E D S S T N H I
pt041415_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - M A S T A I P Q P M E G L R D S V P P P F L T K T Y D I I E D A S T N H I
 
AT5G43840.1     V S W S R D N N S F I V W E P E T F A L I C L P R C F K H N N F S S F V R Q L N T Y G F K K I D T E R W E F A N E H F L
pt035084_POPTR_    I S W S R G N N S F V V W D P Q A F S I S L L P R Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E G F L
pt041415_POPTR_    V S W S R G N N S F I I W D P Q A F S T S L L P R Y F K H N N F S S F V R Q L N T Y G F R K V D P D R W E F A N E G F L
 
AT5G43840.1     K G E R H L L K N I K R R K T S S Q T Q T Q S - - - - - - - - - - - - - L E G E I H E L R R D R M A L E V E L V R L R R
pt035084_POPTR_    R G K K H L L K T V R R R K - A P Q T Q T S Q Q A L E A C V E V G T F R L D G E V D R L S R D K Q V L M V E L V K L R Q
pt041415_POPTR_    R G K K H L L K S I R R R K - A P Q T L T S Q - - - - A C V E V G T F G L D G E V N R L R R D K Q V L M V E L V K L R Q
 
AT5G43840.1     K Q E S V K T Y L H L M E E K L K V T E V K Q E M M M N F L L K K I K K P S F L Q S L - - - - - - - - - - - - - - - - -
pt035084_POPTR_    Q Q Q T T R A C L Q L M E Q R V K R N E N K Q Q H M M S F L A R A M Q N P T F V Q Q L V Q Q K D M M K E L E E E I S K K
pt041415_POPTR_    Q Q Q T T K A C I Q L I E R K L K R T E N K Q Q Q M M S F L A R A M Q N P N F V Q Q L A Q Q K E M R K E L E E A I S K K
 
AT5G43840.1     R K R N L - Q G I K N R E Q K Q E V I S S H G V E D N G K F V K A E P E E Y G - - - - - D D I D D Q C G G V F D Y G D E
pt035084_POPTR_    K R R P I D Q G R N N V E V G E - - - F G H G - E G V G T F V K I E P R E F G - - - - - - G F S E - - - - - F E V - P E
pt041415_POPTR_    R R R P I D Q G R S N F E V A E - - - F G H G - E G V G T F V K I E H Q E F G D L S E F D D L S E - - - - - F D V - P E
 
AT5G43840.1     L H I A S M E H Q G Q G E D E I - - - - - - - - - - - - - - - - - - - E M D S E G I W K G F V - - - - - - - - - - - - -
pt035084_POPTR_    F V N L A M N M Q E L N E N Q L I N L D E E C I E K G E E Y E N N G K D F D - E A F W E D L L N E D I - - - - - - - - G
pt041415_POPTR_    F H N P A M N M Q G L S E N Q L I N L V E E R I E K G E E H G N K G N E I D - E G F W E D L L N E D I I D E E I A V L G
 
AT5G43840.1     - - - L S E E E M C D L V E H F I - - - - - - - - - -
pt035084_POPTR_    E Q G E D E E D V N V L V E Q L G Y L G Y S P K - - -
pt041415_POPTR_    S E G E D E E D V S V L V E Q L G Y L G S S T E L R T
 
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