fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G43840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028719 EFEVPDLDLALNLDEE in 379/448 AT3G22830.1 1st_not 0.404513888 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G43840.1     ------------------------------------------------------------
gm028719_Glyma1 MTPNNISPKKKKQKGKRTLASTTTIYIIYKTHVANASGSSTSLYSKSFLPHHHTITLYNK
                                                                            

AT5G43840.1     -----------------------------------MDYNL------------PIPLEGLK
gm028719_Glyma1 STFTAPPSSLSPFYSKFFKSYLRLNQTLNANISLKRDLNLDSLGYQKPIMVVPQPIEGLH
                                                    * **            * *:***:

AT5G43840.1     ETPPTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVR
gm028719_Glyma1 ETGPPPFLTKTYDIVDDPSTNHIVSWSTGNNSFVVWDPQAFSVTLLPKFFKHNNFSSFVR
                ** *..******:**:*.***:***** .****:**:*::*::  **: ***********

AT5G43840.1     QLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQ---------------
gm028719_Glyma1 QLNTYGFKKVDPDKWEFANEMFLRGQRILLKNIRRRKANHHQSHQHAMQQGVEEPFVEVG
                *********:*.::****** **:*:* *****:***:. : . *               

AT5G43840.1     --SLEGEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKK
gm028719_Glyma1 QFELDGEIDRLRRDRQVLMVELVKLRQQQQSTKSHLQEMEGRIKMTEQKQKQMMNFLARA
                  .*:***..***** .* ****:**::*:*.*::*: ** ::*:** **: ***** : 

AT5G43840.1     IKKPSFLQSLRKRNLQGIKNREQKQEVISSHG-----------------------VEDNG
gm028719_Glyma1 MQNPNFVQQLAQQK----EWRKELEEVFSNKKRRPIDQGPNVVEVADDDDELLGCAEECS
                :::*.*:*.* :::    : *:: :**:*.:                        .*: .

AT5G43840.1     KFVKAEPEEYGDDIDDQCGGVFDYG----------DELHIASMEHQGQGE----------
gm028719_Glyma1 DFVKLEPQEYYS--DDK---VLEFEVPDLDLALNLDEENIESQKRIMEEEHVQLENSRER
                .*** **:** .  **:   *:::           ** :* * ::  : *          

AT5G43840.1     --DEI---EMDSEGIWKGFVLSEEEMCDLVEHFI---
gm028719_Glyma1 YIDEVFWQDLLNEGIEDQGVLGVEDVDVLAKQLGYLA
                  **:   :: .*** .  **. *::  *.:::
BoxShade v3.31 C (beta, 970507) Output
AT5G43840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm028719_Glyma1    M T P N N I S P K K K K Q K G K R T L A S T T T I Y I I Y K T H V A N A S G S S T S L Y S K S F L P H H H T I T L Y N K
 
AT5G43840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Y N L - - - - - - - - - - - - P I P L E G L K
gm028719_Glyma1    S T F T A P P S S L S P F Y S K F F K S Y L R L N Q T L N A N I S L K R D L N L D S L G Y Q K P I M V V P Q P I E G L H
 
AT5G43840.1     E T P P T A F L T K T Y N I V E D S S T N N I V S W S R D N N S F I V W E P E T F A L I C L P R C F K H N N F S S F V R
gm028719_Glyma1    E T G P P P F L T K T Y D I V D D P S T N H I V S W S T G N N S F V V W D P Q A F S V T L L P K F F K H N N F S S F V R
 
AT5G43840.1     Q L N T Y G F K K I D T E R W E F A N E H F L K G E R H L L K N I K R R K T S S Q T Q T Q - - - - - - - - - - - - - - -
gm028719_Glyma1    Q L N T Y G F K K V D P D K W E F A N E M F L R G Q R I L L K N I R R R K A N H H Q S H Q H A M Q Q G V E E P F V E V G
 
AT5G43840.1     - - S L E G E I H E L R R D R M A L E V E L V R L R R K Q E S V K T Y L H L M E E K L K V T E V K Q E M M M N F L L K K
gm028719_Glyma1    Q F E L D G E I D R L R R D R Q V L M V E L V K L R Q Q Q Q S T K S H L Q E M E G R I K M T E Q K Q K Q M M N F L A R A
 
AT5G43840.1     I K K P S F L Q S L R K R N L Q G I K N R E Q K Q E V I S S H G - - - - - - - - - - - - - - - - - - - - - - - V E D N G
gm028719_Glyma1    M Q N P N F V Q Q L A Q Q K - - - - E W R K E L E E V F S N K K R R P I D Q G P N V V E V A D D D D E L L G C A E E C S
 
AT5G43840.1     K F V K A E P E E Y G D D I D D Q C G G V F D Y G - - - - - - - - - - D E L H I A S M E H Q G Q G E - - - - - - - - - -
gm028719_Glyma1    D F V K L E P Q E Y Y S - - D D K - - - V L E F E V P D L D L A L N L D E E N I E S Q K R I M E E E H V Q L E N S R E R
 
AT5G43840.1     - - D E I - - - E M D S E G I W K G F V L S E E E M C D L V E H F I - - -
gm028719_Glyma1    Y I D E V F W Q D L L N E G I E D Q G V L G V E D V D V L A K Q L G Y L A
 
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