fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004872 not found in 266aa AT5G44080.1 1st_1st 0.194285714 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44080.1     MTSFQVMRSSNSRN--SDLSRRISSASTSSSSIRPQQQFRRDLTSVGYGGRNDGLYSSNS
Os004872_Os01t0 MMASRVMASSSPSHTASDLARFAAGRG---------------------GGGSAGL---GS
                * : :** **.. :  ***:*  :. .                     ** . **   .*

AT5G44080.1     MTVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVVDHGGGTETTRG
Os004872_Os01t0 MNVEEILRGIYAD---MPTPALPLVGGDRPMSPLPAP------------------DVAAA
                *.** **:. :*.    ** :  * .. . *.. ***                  :.: .

AT5G44080.1     GKSVDEIWREM-------------------------VSGEGKGMKEETSEEIMTLEDFLA
Os004872_Os01t0 PRTAEEVWKEITGAGVAAAAGGVVPPAAAAAAAPAVVAGAGAGTGAE-----MTLEDFLA
                 ::.:*:*:*:                         *:* * *   *     ********

AT5G44080.1     K--AAVEDETAVTASAEDLDVKIPVTNYGFDHSAPPHNPFQMIDKVEGSIV-AFGNGLDV
Os004872_Os01t0 REGAVKEDEAVVT-----------------DPSA-----------AKGQVVMGFLNGAEV
                :  *. ***:.**                 * **           .:*.:* .* ** :*

AT5G44080.1     YGGGARGK-RARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEE
Os004872_Os01t0 TGGVTGGRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEE
                 ** : *: * * :::*:*:** ***:******************* .***:*.::****

AT5G44080.1     NELLSKEIEDKRKERYQKLMEFVIPVVEKPKQQPPRFLRRIRSLEW
Os004872_Os01t0 NAKMFKEQEEQHQKRLKELKEMVVPVI--IRKTSARDLRRTNSMEW
                *  : ** *:::::* ::* *:*:**:   :: ..* *** .*:**
BoxShade v3.31 C (beta, 970507) Output
AT5G44080.1     M T S F Q V M R S S N S R N - - S D L S R R I S S A S T S S S S I R P Q Q Q F R R D L T S V G Y G G R N D G L Y S S N S
Os004872_Os01t0    M M A S R V M A S S S P S H T A S D L A R F A A G R G - - - - - - - - - - - - - - - - - - - - - G G G S A G L - - - G S
 
AT5G44080.1     M T V E G I L H D T F A S D P P A P T E S S L L D A S I N L M D A S P A P M E I T T T T A S D V V D H G G G T E T T R G
Os004872_Os01t0    M N V E E I L R G I Y A D - - - M P T P A L P L V G G D R P M S P L P A P - - - - - - - - - - - - - - - - - - D V A A A
 
AT5G44080.1     G K S V D E I W R E M - - - - - - - - - - - - - - - - - - - - - - - - - V S G E G K G M K E E T S E E I M T L E D F L A
Os004872_Os01t0    P R T A E E V W K E I T G A G V A A A A G G V V P P A A A A A A A P A V V A G A G A G T G A E - - - - - M T L E D F L A
 
AT5G44080.1     K - - A A V E D E T A V T A S A E D L D V K I P V T N Y G F D H S A P P H N P F Q M I D K V E G S I V - A F G N G L D V
Os004872_Os01t0    R E G A V K E D E A V V T - - - - - - - - - - - - - - - - - D P S A - - - - - - - - - - - A K G Q V V M G F L N G A E V
 
AT5G44080.1     Y G G G A R G K - R A R V M V E P L D K A A A Q R Q R R M I K N R E S A A R S R E R K Q A Y Q V E L E A L A A K L E E E
Os004872_Os01t0    T G G V T G G R S R K R H L M D P M D R A A M Q R Q K R M I K N R E S A A R S R E R K Q A Y I A E L E S L V T Q L E E E
 
AT5G44080.1     N E L L S K E I E D K R K E R Y Q K L M E F V I P V V E K P K Q Q P P R F L R R I R S L E W
Os004872_Os01t0    N A K M F K E Q E E Q H Q K R L K E L K E M V V P V I - - I R K T S A R D L R R T N S M E W
 
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