fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028515 not found in 181aa AT5G44080.1 1st_1st 0.264761904 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44080.1     MTSFQVMRSSNSRNSDLSRRISSASTSSSSIRPQQQFRRDLTSVGYGGRNDGLYSSNSMT
gm028515_Glyma1 ------------------------------------------------------------
                                                                            

AT5G44080.1     VEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVVDHGGGTETTRGGK
gm028515_Glyma1 ------------------------------------------------------------
                                                                            

AT5G44080.1     SVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKA-AVEDETAVTASAEDL-------DV
gm028515_Glyma1 ------------------------MMTLEDFLAKADAVDDADHDHDHAHDHDPDYHNDDV
                                        :********** **:*       *.*        **

AT5G44080.1     KIPV---------TNYGFDHSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGGARGKRARVM
gm028515_Glyma1 KMPMPLTERLGSGTLFSFDHL--PTTPFH--DPSEGSVIGFGNGVEVIECG-RGKRSRPV
                *:*:         * :.***   * .**:  *  ***::.****::*   * ****:* :

AT5G44080.1     VEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELLSKEIEDKRKE
gm028515_Glyma1 LEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKK
                :* ***** ****************************:**.******: * **  :::*:

AT5G44080.1     RYQKLMEFVIPVVEKPKQQPPRFLRRIRSLEW
gm028515_Glyma1 RYKQLMEKVLPIAQ--KQKPPCILRRARSLQW
                **::*** *:*:.:  **:** :*** ***:*
BoxShade v3.31 C (beta, 970507) Output
AT5G44080.1     M T S F Q V M R S S N S R N S D L S R R I S S A S T S S S S I R P Q Q Q F R R D L T S V G Y G G R N D G L Y S S N S M T
gm028515_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G44080.1     V E G I L H D T F A S D P P A P T E S S L L D A S I N L M D A S P A P M E I T T T T A S D V V D H G G G T E T T R G G K
gm028515_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G44080.1     S V D E I W R E M V S G E G K G M K E E T S E E I M T L E D F L A K A - A V E D E T A V T A S A E D L - - - - - - - D V
gm028515_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - M M T L E D F L A K A D A V D D A D H D H D H A H D H D P D Y H N D D V
 
AT5G44080.1     K I P V - - - - - - - - - T N Y G F D H S A P P H N P F Q M I D K V E G S I V A F G N G L D V Y G G G A R G K R A R V M
gm028515_Glyma1    K M P M P L T E R L G S G T L F S F D H L - - P T T P F H - - D P S E G S V I G F G N G V E V I E C G - R G K R S R P V
 
AT5G44080.1     V E P L D K A A A Q R Q R R M I K N R E S A A R S R E R K Q A Y Q V E L E A L A A K L E E E N E L L S K E I E D K R K E
gm028515_Glyma1    L E Q L D K A A Q Q R Q R R M I K N R E S A A R S R E R K Q A Y Q V E L E S L A V K L E E E N D K L L K E K A E R K K K
 
AT5G44080.1     R Y Q K L M E F V I P V V E K P K Q Q P P R F L R R I R S L E W
gm028515_Glyma1    R Y K Q L M E K V L P I A Q - - K Q K P P C I L R R A R S L Q W
 
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