fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004294 not found in 475aa AT1G03840.1 1st_not 0.532608695 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44160.1     MTSEVLQT----ISSGSGFAQ-PQSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIAL
pt004294_POPTR_ MLEKIMATEEAITSSNNGFVENPVGGS---------NPPALKKKRNLPGTPDPEAEVIAL
                * .::: *     **..**.: * ..*         *** :********.**********

AT5G44160.1     SPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCV
pt004294_POPTR_ SPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKRVYVCPEKTCV
                **.***********:****************************.***:************

AT5G44160.1     HHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGT
pt004294_POPTR_ HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGT
                ***.***********************.****:*********************:*****

AT5G44160.1     IFSRRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAPGSVNLNYQYLMGTFIPPLQP
pt004294_POPTR_ LFSRRDSFITHRAFCDALAEETARVNAVSSINNLTA----GSINY---HLMGN---PLGP
                :**********************::**** :*.*:*    **:*    :***.   ** *

AT5G44160.1     FVPQPQTNPNHHHQHFQPPTSSS-------LSLWMGQDI---------------------
pt004294_POPTR_ NMAQ------HFSSIFKPISSNDHQTRQGGVSLWMNQGVPQVSEALMGNNIQEIHQLRSA
                 :.*      *. . *:* :*..       :****.*.:                     

AT5G44160.1     -----------------APPQPQPDYDW-VFGNAKAASACIDNNNTHDEQIT------QN
pt004294_POPTR_ NSSGAMFGDLLAVSCSHAPPSDHYQFNWPVFGNK------ISSNNAHEELTSTLVLPLTN
                                 ***. : :::* ****       *..**:*:*  :       *

AT5G44160.1     ANASLTTTTTLSAPSLFSSDQPQNANANSNVNMSATALLQKAAEIGATSTTTAATNDPST
pt004294_POPTR_ VKEAAAASQLASVPSLYSTQQ-QQSHQTTSANMSATALLQKAAQIGATST------DPS-
                .: : :::   *.***:*::* *::: .:..************:******      *** 

AT5G44160.1     FLQSFPLKSTDQTTSYDSGEKFFALFGSNNNIGLMSRSHDHQEIENARNDVTVASALDEL
pt004294_POPTR_ FLGSFALKSNAKKVQ--DGNKFCGLYGSSP-----VSTNPASDVENSGSDQI--SSLNQL
                ** **.***. :...  .*:** .*:**.        ::  .::**: .*    *:*::*

AT5G44160.1     QNYPWKRRRVDGGGEVGGGGQTRDFLGVGVQTLCHPSSINGWI
pt004294_POPTR_ QMYPKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI
                * ** ::: .:.. :  .*************::**********
BoxShade v3.31 C (beta, 970507) Output
AT5G44160.1     M T S E V L Q T - - - - I S S G S G F A Q - P Q S S S T L D H D E S L I N P P L V K K K R N L P G N P D P E A E V I A L
pt004294_POPTR_    M L E K I M A T E E A I T S S N N G F V E N P V G G S - - - - - - - - - N P P A L K K K R N L P G T P D P E A E V I A L
 
AT5G44160.1     S P T T L M A T N R F L C E V C G K G F Q R D Q N L Q L H R R G H N L P W K L K Q R T S K E V R K R V Y V C P E K T C V
pt004294_POPTR_    S P K T L M A T N R F L C E I C G K G F Q R D Q N L Q L H R R G H N L P W K L K Q R T N K E V K K R V Y V C P E K T C V
 
AT5G44160.1     H H H S S R A L G D L T G I K K H F C R K H G E K K W T C E K C A K R Y A V Q S D W K A H S K T C G T R E Y R C D C G T
pt004294_POPTR_    H H H P S R A L G D L T G I K K H F C R K H G E K K W K C E K C S K R Y A V Q S D W K A H S K T C G T R E Y K C D C G T
 
AT5G44160.1     I F S R R D S F I T H R A F C D A L A E E T A K I N A V S H L N G L A A A G A P G S V N L N Y Q Y L M G T F I P P L Q P
pt004294_POPTR_    L F S R R D S F I T H R A F C D A L A E E T A R V N A V S S I N N L T A - - - - G S I N Y - - - H L M G N - - - P L G P
 
AT5G44160.1     F V P Q P Q T N P N H H H Q H F Q P P T S S S - - - - - - - L S L W M G Q D I - - - - - - - - - - - - - - - - - - - - -
pt004294_POPTR_    N M A Q - - - - - - H F S S I F K P I S S N D H Q T R Q G G V S L W M N Q G V P Q V S E A L M G N N I Q E I H Q L R S A
 
AT5G44160.1     - - - - - - - - - - - - - - - - - A P P Q P Q P D Y D W - V F G N A K A A S A C I D N N N T H D E Q I T - - - - - - Q N
pt004294_POPTR_    N S S G A M F G D L L A V S C S H A P P S D H Y Q F N W P V F G N K - - - - - - I S S N N A H E E L T S T L V L P L T N
 
AT5G44160.1     A N A S L T T T T T L S A P S L F S S D Q P Q N A N A N S N V N M S A T A L L Q K A A E I G A T S T T T A A T N D P S T
pt004294_POPTR_    V K E A A A A S Q L A S V P S L Y S T Q Q - Q Q S H Q T T S A N M S A T A L L Q K A A Q I G A T S T - - - - - - D P S -
 
AT5G44160.1     F L Q S F P L K S T D Q T T S Y D S G E K F F A L F G S N N N I G L M S R S H D H Q E I E N A R N D V T V A S A L D E L
pt004294_POPTR_    F L G S F A L K S N A K K V Q - - D G N K F C G L Y G S S P - - - - - V S T N P A S D V E N S G S D Q I - - S S L N Q L
 
AT5G44160.1     Q N Y P W K R R R V D G G G E V G G G G Q T R D F L G V G V Q T L C H P S S I N G W I
pt004294_POPTR_    Q M Y P K R Q K I F Q S D Q D S P A G G Q T R D F L G V G V Q A I C H P S S I N G W I
 
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