fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007023 not found in 444aa AT1G03840.2 1st_not 0.400966183 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44160.1     MTSEVLQTISSGSGFAQPQSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIALSPTTL
Sb007023_Sorbi1 --------------------------------------------MANPDAEVIALSPRTL
                                                             .:*:******** **

AT5G44160.1     MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS
Sb007023_Sorbi1 LATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKTCVHHNPS
                :*****:**:************************:**:.** ***************:.*

AT5G44160.1     RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSR-
Sb007023_Sorbi1 RALGDLTGIKKHFCRKHGEKKWKCDKCNKRYAVQSDWKAHAKTCGTREYRCDCGTLFSRH
                **********************.*:** ************:**************:*** 

AT5G44160.1     ------------RDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAPGSVNLNYQYLMG
Sb007023_Sorbi1 VVVVRSQFLPCWRDSFITHRAFCDALAEETARLNAAS------SAGAATS------YLFA
                            *******************::**.*      :***. *      **:.

AT5G44160.1     TFIPPLQPFV-----PQPQTNPNHHHQHFQPPTSSSLSLWMGQDIAP-------------
Sb007023_Sorbi1 GSPPGLHPNMMLPPAPAPAPAPGPHLKPLGPHVVGGLSLWGGGDALPSMVGHIGATGGIL
                   * *:* :     * * . *. * : : * . ..**** * *  *             

AT5G44160.1     ------------------PQPQPDYDWVFGN-AKAASACIDNNNTHDEQITQNANASLTT
Sb007023_Sorbi1 LPGGEPAVPPQLYADLFSPAP-PQLGWLCGNGSKLAS-------SNASELTSAAAASGKQ
                                  * * *: .*: ** :* **       :: .::*. * ** . 

AT5G44160.1     TTTLSAPSLFSSDQPQNANANSNVNMSATALLQKAAEIGA-TSTTTAATNDPSTFLQSFP
Sb007023_Sorbi1 DTD----SVFSGQHHAKPTAPA-ADMSATALLQKAAQMGAVTSGSGNAMSMPPGALE--P
                 *     *:**.::  :..* : .:***********::** ** :  * . *.  *:  *

AT5G44160.1     LKSTDQTTSYDSGEKFFALFGSNNNIGLMSRSHDHQEIENARNDVTVASA-------LDE
Sb007023_Sorbi1 ADIGHHQSSDGAGGLLFSASSQQNATNLRLRGTDTTLI---MSHLTAAAAGNMPYDVLSA
                 .  .: :* .:*  :*:  ..:*  .*  *. *   *    ..:*.*:*       *. 

AT5G44160.1     LQNYPWKRRRVDGGGEVGGGGQTRDFLGVGVQTLCHPSSINGWI
Sb007023_Sorbi1 VRHAGLKDAAVAVGRE-----ETRDFLGVGVQALC-SSSLNGWI
                :::   *   *  * *     :**********:** .**:****
BoxShade v3.31 C (beta, 970507) Output
AT5G44160.1     M T S E V L Q T I S S G S G F A Q P Q S S S T L D H D E S L I N P P L V K K K R N L P G N P D P E A E V I A L S P T T L
Sb007023_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A N P D A E V I A L S P R T L
 
AT5G44160.1     M A T N R F L C E V C G K G F Q R D Q N L Q L H R R G H N L P W K L K Q R T S K E V R K R V Y V C P E K T C V H H H S S
Sb007023_Sorbi1    L A T N R F V C E I C G K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S G K E P R K R V Y V C P E K T C V H H N P S
 
AT5G44160.1     R A L G D L T G I K K H F C R K H G E K K W T C E K C A K R Y A V Q S D W K A H S K T C G T R E Y R C D C G T I F S R -
Sb007023_Sorbi1    R A L G D L T G I K K H F C R K H G E K K W K C D K C N K R Y A V Q S D W K A H A K T C G T R E Y R C D C G T L F S R H
 
AT5G44160.1     - - - - - - - - - - - - R D S F I T H R A F C D A L A E E T A K I N A V S H L N G L A A A G A P G S V N L N Y Q Y L M G
Sb007023_Sorbi1    V V V V R S Q F L P C W R D S F I T H R A F C D A L A E E T A R L N A A S - - - - - - S A G A A T S - - - - - - Y L F A
 
AT5G44160.1     T F I P P L Q P F V - - - - - P Q P Q T N P N H H H Q H F Q P P T S S S L S L W M G Q D I A P - - - - - - - - - - - - -
Sb007023_Sorbi1    G S P P G L H P N M M L P P A P A P A P A P G P H L K P L G P H V V G G L S L W G G G D A L P S M V G H I G A T G G I L
 
AT5G44160.1     - - - - - - - - - - - - - - - - - - P Q P Q P D Y D W V F G N - A K A A S A C I D N N N T H D E Q I T Q N A N A S L T T
Sb007023_Sorbi1    L P G G E P A V P P Q L Y A D L F S P A P - P Q L G W L C G N G S K L A S - - - - - - - S N A S E L T S A A A A S G K Q
 
AT5G44160.1     T T T L S A P S L F S S D Q P Q N A N A N S N V N M S A T A L L Q K A A E I G A - T S T T T A A T N D P S T F L Q S F P
Sb007023_Sorbi1    D T D - - - - S V F S G Q H H A K P T A P A - A D M S A T A L L Q K A A Q M G A V T S G S G N A M S M P P G A L E - - P
 
AT5G44160.1     L K S T D Q T T S Y D S G E K F F A L F G S N N N I G L M S R S H D H Q E I E N A R N D V T V A S A - - - - - - - L D E
Sb007023_Sorbi1    A D I G H H Q S S D G A G G L L F S A S S Q Q N A T N L R L R G T D T T L I - - - M S H L T A A A A G N M P Y D V L S A
 
AT5G44160.1     L Q N Y P W K R R R V D G G G E V G G G G Q T R D F L G V G V Q T L C H P S S I N G W I
Sb007023_Sorbi1    V R H A G L K D A A V A V G R E - - - - - E T R D F L G V G V Q A L C - S S S L N G W I
 
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