fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44210.1 VEPRRELNLDLNLAPP at 185/200 in AT5G44210.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022250 MPIPPSLELDLFHRAA in 133/236 AT5G44210.1 1st_1st 0.276657060 Ib
KKAIAFDLDLNCPPPMEV in 224/236
Gm016536 CQPKRELNLDLNLAPP in 195/208 AT5G44210.1 1st_1st 0.351585014 Ib
Pt004210 PRRSVLDLDLNLPPPLDA in 201/213 AT5G44210.1 1st_1st 0.360230547 Ib
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G44210.1     MAPRQANG--------RSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPG
Os022250_Os05t0 MAPRTSDKTMSPAAAATGLALGVGGVAGAAAVGTGQ---HFRGVRKRPWGRYAAEIRDPA
pt004210_POPTR_ MAPKKLN-------------ASNSGCFKKASGDHDKKEIHYRGVRKRPWGRYAAEIRDPG
gm016536_Glyma0 MVKEKKN-------------V----VVKNKKPNNNADELHFRGVRKRPWGRYAAEIRDPG
                *. .  :                                *:******************.

AT5G44210.1     KKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL-----PGESTTVNDGG----EN
Os022250_Os05t0 KKSRVWLGTFDTAEEAARAYDAAAREYRGAKAKTNFPYP---NGAPAAGVNSGS------
pt004210_POPTR_ KKSRVWLGTFDTAEEAAKAYDKAAREYRGAKAKTNFPF-----SGEVVNYDDDK------
gm016536_Glyma0 KKTRVWLGTFDTAEDAARAYDAAARNFRGPKAKTNFPVPPDDNNNNNVNVNKNKSVNVKS
                **:***********:**:*** ***::**.*******          .  :..       

AT5G44210.1     DSYVNRTTV---------------------------TTAREMTRQR-------------F
Os022250_Os05t0 ---SNSSTVESFGSDVQAPMKAMPIPPSLELDLFHRAAAAA------AAGAGGMR----F
pt004210_POPTR_ QSSSHSSTVESSSSP---------------------VVSAAVTRQVGGGGVGGVVGMGGF
gm016536_Glyma0 HSPSQSSTVESATPEREAT---------------RRSTSAAIDR---------------F
                    : :**                            .:                    *

AT5G44210.1     PFA-CHRERKVVGGYAS---AGFFFDPSRAASLRAE-LSRVCPVRFDPVNIELSIGIRE-
Os022250_Os05t0 PFE--------GYPVSH---PYYFFG----QAAAAAAASGCRMLKIAPAPVTVAALAQSD
pt004210_POPTR_ PFV-YQQQQQNVNVVA----PVWFFD-----SVRPEFVTQRFPVRFDQVGLESAGGAQSD
gm016536_Glyma0 PFLPIQQQILMTHPVAAPMRPVFFLD-------RAHFMTQSFPLRFE------PGPVQSD
                **             :    . :*:.        .   :    :::       .   :. 

AT5G44210.1     ------TVKVEP-------RRE--LNLDLNLAPPVVDV
Os022250_Os05t0 SDSSS-IVDLAPSPPAALAKKAIAFDLDLNCPPPMEV-
pt004210_POPTR_ SDSSS-MVDCQP-------RRSV-LDLDLNLPPPLDA-
gm016536_Glyma0 SDSSSVVVDCQP-------KRE--LNLDLNLAPPNEY-
                       *.  *       ::   ::**** .**
BoxShade v3.31 C (beta, 970507) Output
AT5G44210.1     M A P R Q A N G - - - - - - - - R S I A V S E G G G G K T M T M T T M R K E V H F R G V R K R P W G R Y A A E I R D P G
Os022250_Os05t0    M A P R T S D K T M S P A A A A T G L A L G V G G V A G A A A V G T G Q - - - H F R G V R K R P W G R Y A A E I R D P A
pt004210_POPTR_    M A P K K L N - - - - - - - - - - - - - A S N S G C F K K A S G D H D K K E I H Y R G V R K R P W G R Y A A E I R D P G
gm016536_Glyma0    M V K E K K N - - - - - - - - - - - - - V - - - - V V K N K K P N N N A D E L H F R G V R K R P W G R Y A A E I R D P G
 
AT5G44210.1     K K T R V W L G T F D T A E E A A R A Y D T A A R E F R G S K A K T N F P L - - - - - P G E S T T V N D G G - - - - E N
Os022250_Os05t0    K K S R V W L G T F D T A E E A A R A Y D A A A R E Y R G A K A K T N F P Y P - - - N G A P A A G V N S G S - - - - - -
pt004210_POPTR_    K K S R V W L G T F D T A E E A A K A Y D K A A R E Y R G A K A K T N F P F - - - - - S G E V V N Y D D D K - - - - - -
gm016536_Glyma0    K K T R V W L G T F D T A E D A A R A Y D A A A R N F R G P K A K T N F P V P P D D N N N N N V N V N K N K S V N V K S
 
AT5G44210.1     D S Y V N R T T V - - - - - - - - - - - - - - - - - - - - - - - - - - - T T A R E M T R Q R - - - - - - - - - - - - - F
Os022250_Os05t0    - - - S N S S T V E S F G S D V Q A P M K A M P I P P S L E L D L F H R A A A A A - - - - - - A A G A G G M R - - - - F
pt004210_POPTR_    Q S S S H S S T V E S S S S P - - - - - - - - - - - - - - - - - - - - - V V S A A V T R Q V G G G G V G G V V G M G G F
gm016536_Glyma0    H S P S Q S S T V E S A T P E R E A T - - - - - - - - - - - - - - - R R S T S A A I D R - - - - - - - - - - - - - - - F
 
AT5G44210.1     P F A - C H R E R K V V G G Y A S - - - A G F F F D P S R A A S L R A E - L S R V C P V R F D P V N I E L S I G I R E -
Os022250_Os05t0    P F E - - - - - - - - G Y P V S H - - - P Y Y F F G - - - - Q A A A A A A A S G C R M L K I A P A P V T V A A L A Q S D
pt004210_POPTR_    P F V - Y Q Q Q Q Q N V N V V A - - - - P V W F F D - - - - - S V R P E F V T Q R F P V R F D Q V G L E S A G G A Q S D
gm016536_Glyma0    P F L P I Q Q Q I L M T H P V A A P M R P V F F L D - - - - - - - R A H F M T Q S F P L R F E - - - - - - P G P V Q S D
 
AT5G44210.1     - - - - - - T V K V E P - - - - - - - R R E - - L N L D L N L A P P V V D V
Os022250_Os05t0    S D S S S - I V D L A P S P P A A L A K K A I A F D L D L N C P P P M E V -
pt004210_POPTR_    S D S S S - M V D C Q P - - - - - - - R R S V - L D L D L N L P P P L D A -
gm016536_Glyma0    S D S S S V V V D C Q P - - - - - - - K R E - - L N L D L N L A P P N E Y -
 
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